Esempio n. 1
0
        public static ExporterBase <ScanResult> CreateMSScanInfoExporterFactory(Globals.ExporterType exporterType,
                                                                                Globals.MSFileType msFileType, string outputFileName)
        {
            Check.Assert(!string.IsNullOrEmpty(outputFileName), "MSScanInfoExporterFactory cannot work. OutputFileName is empty - which is bad.");
            ExporterBase <ScanResult> msFeatureExporter;


            switch (exporterType)
            {
            case Globals.ExporterType.Text:

                switch (msFileType)
                {
                case Globals.MSFileType.PNNL_UIMF:
                    msFeatureExporter = new MSScanInfoToTextFileExporterUIMF(outputFileName);
                    break;

                default:
                    msFeatureExporter = new MSScanInfoToTextFileExporterBasic(outputFileName);
                    break;
                }

                break;

            case Globals.ExporterType.Sqlite:

                switch (msFileType)
                {
                case Globals.MSFileType.PNNL_UIMF:
                    msFeatureExporter = new MSScanInfoToSQLiteExporterUIMF(outputFileName);
                    break;

                default:
                    msFeatureExporter = new MSScanInfoToSQLiteExporterBasic(outputFileName);
                    break;
                }
                break;

            default:
                throw new NotImplementedException();
            }

            return(msFeatureExporter);
        }
Esempio n. 2
0
        public void outputToText_UIMFData_Test1()
        {
            var exportedFile = exportedMSScanInfoToTextFileFromUIMFFile1;


            if (File.Exists(exportedFile))
            {
                File.Delete(exportedFile);
            }

            //create run and get some results
            var run = TestDataCreationUtilities.CreateResultsFromTwoFramesOfStandardUIMFData();

            ExporterBase <ScanResult> exporter = new DeconTools.Backend.FileIO.MSScanInfoToTextFileExporterUIMF(exportedFile);

            exporter.ExportResults(run.ResultCollection.ScanResultList);

            Assert.AreEqual(true, File.Exists(exportedFile));

            var fi = new FileInfo(exportedFile);

            Assert.AreEqual(220, fi.Length);
            Console.Write(fi.Length);
        }