private static VirusCount.BestSoFar <int, string> FindBest(Dictionary <string, int> originalAA0PositionToCount)
{
VirusCount.BestSoFar <int, string> bestSoFar = VirusCount.BestSoFar <int, string> .GetInstance(SpecialFunctions.IntGreaterThan);
foreach (KeyValuePair <string, int> originalAA0PositionAndCount in originalAA0PositionToCount)
{
bestSoFar.Compare(originalAA0PositionAndCount.Value, originalAA0PositionAndCount.Key);
}
return(bestSoFar);
}
private static Dictionary <string, string> FindMerStringToBestOriginalAA0Position(int merLength, TextWriter textWriterForWarnings, Dictionary <string, AASeq> caseToCompressedAASeq)
{
Dictionary <string, Dictionary <string, int> > merStringToOriginalAA0PositionToCount = CreateMerStringToOriginalAA0PositionToCount(merLength, textWriterForWarnings, caseToCompressedAASeq);
Dictionary <string, string> merStringToBestOriginalAA0Position = new Dictionary <string, string>();
foreach (string merString in merStringToOriginalAA0PositionToCount.Keys)
{
Dictionary <string, int> originalAA0PositionToCount = merStringToOriginalAA0PositionToCount[merString];
VirusCount.BestSoFar <int, string> best = FindBest(originalAA0PositionToCount);
merStringToBestOriginalAA0Position.Add(merString, best.Champ);
}
return(merStringToBestOriginalAA0Position);
}