private bool IsAlphaHelix(
UnitVector3D firstVector,
UnitVector3D secondVector,
UnitVector3D thirdVector)
{
var firstDistance = firstVector.Magnitude();
var secondDistance = secondVector.Magnitude();
var thirdDistance = thirdVector.Magnitude();
if (secondDistance > firstDistance && secondDistance > thirdDistance)
{
return(true);
}
return(false);
}
private UnitVector3D InteractWithReservoir(
UnitVector3D velocity,
UnitValue mass,
UnitValue reservoirTemperature)
{
var velocityMagnitude = velocity.Magnitude();
var targetVelocity = Math.Sqrt(3 * (PhysicalConstants.BoltzmannsConstant * reservoirTemperature / mass).Value).To(Unit.MetersPerSecond);
if (velocityMagnitude > targetVelocity)
{
const double DampingSpeed = 0.5; // Between 0 (no damping) and 1 (full damping)
var damping = 1 - DampingSpeed * (velocityMagnitude - targetVelocity).Value / velocityMagnitude.Value;
return(damping * velocity);
}
return(velocity);
}