public List <MicStep> StepsByTestingMethodAndAgent(SpeciesTestingMethod testingMethod, AntifungalAgent agent)
{
return(new List <MicStep>()
{
new MicStep {
Title = "≤4", Value = 4, LowerBoundary = true
},
new MicStep {
Title = "8", Value = 8
},
new MicStep {
Title = "≥16", Value = 16, UpperBoundary = true
}
});
}
public List <MicStep> StepsByTestingMethodAndAgent(SpeciesTestingMethod testingMethod, AntifungalAgent agent)
{
List <MicStep> agentSteps = null;
_micSteps.TryGetValue(testingMethod, out var testingMethodSteps);
testingMethodSteps?.TryGetValue(agent, out agentSteps);
if (agentSteps == null)
{
_logger.LogInformation("No MIC steps for {testingMethod}/{agent} found", testingMethod, agent);
return(new List <MicStep>());
}
_logger.LogInformation("Found {stepCount} MIC steps for {testingMethod}/{agent} found",
agentSteps.Count, testingMethod, agent);
agentSteps.First().LowerBoundary = true;
agentSteps.Last().UpperBoundary = true;
return(agentSteps);
}
public bool IsMultiAgentSystem(SpeciesTestingMethod testingMethod)
{
return(true);
}
public IEnumerable <BrothMicrodilutionStandard> Standards(SpeciesTestingMethod testingMethod)
{
return(EnumUtils.AllEnumValues <BrothMicrodilutionStandard>().Where(t => t != BrothMicrodilutionStandard.None));
}
public IEnumerable <AntifungalAgent> AntifungalAgents(SpeciesTestingMethod testingMethod)
{
return(new List <AntifungalAgent> {
AntifungalAgent.AmphotericinB
});
}
public bool IsMultiAgentSystem(SpeciesTestingMethod testingMethod)
{
return(_multiAgentSystems.Contains(testingMethod));
}
public IEnumerable <BrothMicrodilutionStandard> Standards(SpeciesTestingMethod testingMethod)
{
_standards.TryGetValue(testingMethod, out var standards);
return(standards ?? EnumUtils.AllEnumValues <BrothMicrodilutionStandard>().Where(t => t != BrothMicrodilutionStandard.None));
}
public IEnumerable <AntifungalAgent> AntifungalAgents(SpeciesTestingMethod speciesTestingMethod)
{
var antifungalAgents = _micSteps[speciesTestingMethod].Keys;
return(antifungalAgents.ToImmutableSortedSet(new AntifungalAgentComparer()));
}
