private SimulationEnzymaticProcessSelectionDTO mapFrom(SimulationPartialProcess simulationPartialProcess)
{
var dto = new SimulationEnzymaticProcessSelectionDTO(simulationPartialProcess);
updateMetabliteSelectionFor(dto);
return(dto);
}
protected override void Context()
{
base.Context();
_partialProcess1Enzyme1 = A.Fake <SimulationPartialProcess>();
_partialProcess1Enzyme1.CompoundProcess = new EnzymaticProcess {
MetaboliteName = "Met1"
};
_partialProcess1Enzyme2 = A.Fake <SimulationPartialProcess>();
_partialProcess1Enzyme2.CompoundProcess = new EnzymaticProcess {
MetaboliteName = "Metabolite"
};
_partialProcesses.Add(_partialProcess1Enzyme1);
_partialProcesses.Add(_partialProcess1Enzyme2);
A.CallTo(() => _view.BindToPartialProcesses(A <IReadOnlyCollection <SimulationEnzymaticProcessSelectionDTO> > ._))
.Invokes(x => _allPartialProcessDTO = x.GetArgument <IReadOnlyCollection <SimulationEnzymaticProcessSelectionDTO> >(0).ToList());
_simulation.AddUsedBuildingBlock(new UsedBuildingBlock("Comp", PKSimBuildingBlockType.Compound)
{
BuildingBlock = _compound
});
_simulation.AddUsedBuildingBlock(new UsedBuildingBlock("Metabolite", PKSimBuildingBlockType.Compound)
{
BuildingBlock = new Compound().WithName("Metabolite")
});
}
protected override void Context()
{
base.Context();
_enzyme1 = new IndividualEnzyme {
Name = "CYP3A4"
};
_enzyme2 = new IndividualEnzyme {
Name = "CYP2D6"
};
_partialProcess1Enzyme1 = new SimulationPartialProcess {
CompoundProcess = new EnzymaticProcess(), IndividualMolecule = _enzyme1
};
_partialProcess1Enzyme2 = new SimulationPartialProcess {
CompoundProcess = new EnzymaticProcess(), IndividualMolecule = _enzyme2
};
_partialProcess1Enzyme3 = new SimulationPartialProcess {
CompoundProcess = new EnzymaticProcess(), IndividualMolecule = _enzyme2
};
_partialProcesses.Add(_partialProcess1Enzyme1);
_partialProcesses.Add(_partialProcess1Enzyme2);
_partialProcesses.Add(_partialProcess1Enzyme3);
A.CallTo(() => _view.BindToPartialProcesses(A <IReadOnlyCollection <SimulationEnzymaticProcessSelectionDTO> > ._))
.Invokes(x => _allPartialProcessDTO = x.GetArgument <IReadOnlyCollection <SimulationEnzymaticProcessSelectionDTO> >(0).ToList());
sut.EditProcessesIn(_simulation, _compoundProperties);
}
protected override void Context()
{
base.Context();
_partialProcess1Enzyme1 = A.Fake <SimulationPartialProcess>();
_partialProcess1Enzyme1.CompoundProcess = new EnzymaticProcess {
MetaboliteName = "Met1"
};
_partialProcess1Enzyme2 = A.Fake <SimulationPartialProcess>();
_partialProcess1Enzyme2.CompoundProcess = new EnzymaticProcess {
MetaboliteName = "Metabolite"
};
_partialProcesses.Add(_partialProcess1Enzyme1);
_partialProcesses.Add(_partialProcess1Enzyme2);
_simulation.AddUsedBuildingBlock(new UsedBuildingBlock("Comp", PKSimBuildingBlockType.Compound)
{
BuildingBlock = _compound
});
_simulation.AddUsedBuildingBlock(new UsedBuildingBlock("Metabolite", PKSimBuildingBlockType.Compound)
{
BuildingBlock = new Compound().WithName("Metabolite")
});
sut.EditProcessesIn(_simulation, _compoundProperties);
}
protected override void Context()
{
base.Context();
_partialProcessEnzyme = A.Fake <SimulationPartialProcess>();
_partialProcesses.Add(_partialProcessEnzyme);
_partialProcessEnzyme.CompoundProcess = _partialProcessRetriever.NotSelectedPartialProcess.DowncastTo <EnzymaticProcess>();
_simulation.AddUsedBuildingBlock(new UsedBuildingBlock("Comp", PKSimBuildingBlockType.Compound)
{
BuildingBlock = _compound
});
sut.EditProcessesIn(_simulation, _compoundProperties);
}
protected override void Context()
{
base.Context();
_partialProcess1Enzyme1 = A.Fake <SimulationPartialProcess>();
_partialProcess1Enzyme1.CompoundProcess = new EnzymaticProcess {
MetaboliteName = "Met1"
};
_partialProcesses.Add(_partialProcess1Enzyme1);
_simulation.AddUsedBuildingBlock(new UsedBuildingBlock("Comp", PKSimBuildingBlockType.Compound)
{
BuildingBlock = _compound
});
}
public void AddPartialProcessMappingBaseOn(SimulationEnzymaticProcessSelectionDTO processSelectionDTO)
{
var currentSimulationPartialProcess = processSelectionDTO.SimulationPartialProcess;
var newProcess = new SimulationPartialProcess
{
CompoundProcess = _notSelectedPartialProcess,
IndividualMolecule = currentSimulationPartialProcess.IndividualMolecule,
};
var newProcessDTO = mapFrom(newProcess);
var insertIndex = _allPartialProcessesDTO.IndexOf(processSelectionDTO);
_allPartialProcessesDTO.Insert(insertIndex + 1, newProcessDTO);
rebindPartialProcess();
}
protected override void Context()
{
base.Context();
_compound.AddProcess(new SystemicProcess {
Name = "PLS", InternalName = "PLS", SystemicProcessType = SystemicProcessTypes.Hepatic
});
_compound.AddProcess(new EnzymaticProcess {
Name = "Partial", InternalName = "MM"
});
var simulationPartialProcess = new SimulationPartialProcess {
CompoundProcess = new EnzymaticProcess {
MoleculeName = "MOL"
}
};
A.CallTo(_partialProcessRetriever).WithReturnType <IReadOnlyList <SimulationPartialProcess> >().Returns(new[] { simulationPartialProcess });
}
public SimulationPartialProcessSelectionDTO(SimulationPartialProcess simulationPartialProcess)
{
SimulationPartialProcess = simulationPartialProcess;
}
public SimulationEnzymaticProcessSelectionDTO(SimulationPartialProcess enzymaticProcess)
: base(enzymaticProcess)
{
}
private SimulationInteractionProcessSelectionDTO mapFrom(SimulationPartialProcess x)
{
return(new SimulationInteractionProcessSelectionDTO(x));
}
public SimulationInteractionProcessSelectionDTO(SimulationPartialProcess simulationPartialProcess) : base(simulationPartialProcess)
{
}