//Base init method for map objects
protected void MapObjectInit()
{
on = true;
z = 0;
manager = GameObject.Find("Manager").GetComponent <Manager>();
manager.AddMapObject(this);
display = GetComponentInChildren <SelectDisplay>();
}
public Molecule(Molecule m)
: base(m)
{
chains = new List<Chain> ();
residues = new List<Residue> ();
atoms = new List<Atom> ();
for (int i = 0; i<m.Chains.Count; i++) {
Chain c= new Chain(m.Chains[i]);
this.Chains.Add(c);
for (int j = 0; j<m.Chains[i].Residues.Count; j++) {
Residue r = new Residue(m.Chains[i].Residues[j],c);
this.Chains[i].Residues.Add(r);
this.Residues.Add(r);
for (int k =0; k<m.Chains[i].Residues[j].Atoms.Count; k++) {
Atom a = new Atom(m.Chains[i].Residues[j].Atoms[k],r,c);
this.Chains[i].Residues[j].Atoms.Add(a);
this.Chains[i].Atoms.Add(a);
this.Atoms.Add(a);
}
}
}
bonds = new List<int[]> (m.Bonds);
chainsBonds = new List<List<int>> (m.chainsBonds);
color = m.color;
type = m.type;
render = m.render;
select = m.select;
energies = m.energies;
}
public void SetSelect(SelectDisplay s,int index)
{
switch (s) {
case SelectDisplay.Atom :
if(!selects[index].MinDistAtom.Selected[index]){
selects[index].MinDistAtom.Selected[index] = true;
selects[index].MinDistAtom.ForceGameobject[index] = (GameObject)Instantiate (Resources.Load("Prefabs/Arrow") as GameObject,selects[index].MinDistAtom.Location[Main.current_frame], Quaternion.identity);
selects[index].MinDistAtom.ForceGameobject[index].transform.SetParent(transform,true);
selects[index].selectedAtoms.Add(selects[index].MinDistAtom);
}
else{
selects[index].MinDistAtom.Selected[index] = false;
GameObject.Destroy(selects[index].MinDistAtom.ForceGameobject[index]);
selects[index].selectedAtoms.Remove(selects[index].MinDistAtom);
}
break;
case SelectDisplay.Residue :
if(!selects[index].MinDistResidue.Selected[index]){
selects[index].MinDistResidue.Selected[index] = true;
selects[index].MinDistResidue.ForceGameobject[index] =(GameObject)Instantiate (Resources.Load("Prefabs/Arrow") as GameObject,selects[index].MinDistResidue.Location[Main.current_frame], Quaternion.identity);
selects[index].MinDistResidue.ForceGameobject[index].transform.SetParent(transform,true);
selects[index].selectedResidues.Add(selects[index].MinDistResidue);
}
else{
selects[index].MinDistResidue.Selected[index] = false;
GameObject.Destroy(selects[index].MinDistResidue.ForceGameobject[index]);
selects[index].selectedResidues.Remove(selects[index].MinDistResidue);
}
break;
case SelectDisplay.Chain :
if(!selects[index].MinDistChain.Selected[index]){
selects[index].MinDistChain.Selected[index] = true;
selects[index].MinDistChain.ForceGameobject[index] = (GameObject)Instantiate (Resources.Load("Prefabs/Arrow") as GameObject,selects[index].MinDistChain.Location[Main.current_frame], Quaternion.identity);
selects[index].MinDistChain.ForceGameobject[index].transform.SetParent(transform,true);
selects[index].selectedChains.Add(selects[index].MinDistChain);
}
else{
selects[index].MinDistChain.Selected[index] = false;
GameObject.Destroy(selects[index].MinDistChain.ForceGameobject[index]);
selects[index].selectedChains.Remove(selects[index].MinDistChain);
}
break;
default:break;
}
}
