/// <summary>
/// Load scan summaries from a scans file.
/// </summary>
/// <param name="filePath">The file path to the scans file.</param>
public void LoadScansFile(string filePath)
{
this.scansFilePath = filePath;
this.summary = new DatasetSummary();
var reader = new ScansFileReader {
Delimiter = ','
};
var scans = reader.ReadFile(this.scansFilePath);
var dict = this.summary.ScanMetaData;
dict.Clear();
var minScan = int.MaxValue;
var maxScan = int.MinValue;
foreach (var scan in scans)
{
scan.DatasetId = this.GroupId;
dict.Add(scan.Scan, scan);
minScan = Math.Min(minScan, scan.Scan);
maxScan = Math.Max(maxScan, scan.Scan);
}
this.MinScan = minScan;
this.MaxScan = maxScan;
this.TotalScans = maxScan - minScan; // Not truly the total number present; Scans file contains only MS1 scans
this.knownScanNumbers = dict.Values.OrderBy(value => value.Scan).Select(value => value.Scan).ToList();
this.SetNets();
this.IsBackedByFile = true;
}
public static List<ScanSummary> LoadScanSummaries(string path)
{
var scanSummaries = new List<ScanSummary>();
var reader = new ScansFileReader {Delimiter = ','};
var scans = reader.ReadFile(path);
scanSummaries.AddRange(scans);
UpdateStatus("Loaded scan summaries from CSV files.");
return scanSummaries;
}
public static List <ScanSummary> LoadScanSummaries(string path)
{
var scanSummaries = new List <ScanSummary>();
var reader = new ScansFileReader {
Delimiter = ','
};
var scans = reader.ReadFile(path);
scanSummaries.AddRange(scans);
UpdateStatus("Loaded scan summaries from CSV files.");
return(scanSummaries);
}