} /* StartProcessingThread */
private void Processing()
{
processingThreadRunning = true;
PicesDataBase.ThreadInit();
RunLogAddMsg("Retrieving list of SIPPER Files\n");
dbConn.CancelFlag = false;
String[] sipperFileNames = null;
if (String.IsNullOrEmpty(sipperFileName))
{
sipperFileNames = dbConn.SipperFileGetList(cruise, station, deployment);
}
else
{
sipperFileNames = new String[1];
sipperFileNames[0] = sipperFileName;
}
if (sipperFileNames == null)
{
RunLogAddMsg("\n\n ***ERROR*** Not SIPPETR files names were returned.\n\n");
}
else
{
ProcessSipperFiles(sipperFileNames);
}
PicesDataBase.ThreadEnd();
processingThreadCompleted = true;
processingThreadRunning = false;
} /* Processing */
} /* ValidateHowManyToHarvest */
private void ValidateSipperFiles()
{
if (!String.IsNullOrEmpty(sipperFileName))
{
sipperFileNames = new String[1];
sipperFileNames[0] = sipperFileName;
}
else
{
sipperFileNames = mainWinConn.SipperFileGetList(Cruise.Text, Station.Text, Deployment.Text);
}
if (sipperFileNames == null)
{
errorProvider1.SetError(this, "No SIPPER files located.");
validationErrorFound = true;
}
else if (sipperFileNames.Length < 1)
{
errorProvider1.SetError(this, "No SIPPER files located.");
validationErrorFound = true;
}
else
{
errorProvider1.SetError(this, "");
}
//// Next 5 lines set up to help speed up debugging by reducing the number of images loaded.
//String[] temp = new String[2];
//temp[0] = sipperFileNames[1];
//temp[1] = sipperFileNames[2];
//sipperFileNames = temp;
} /* ValidateSipperFiles */
} /* LoadImagesForOneSipperFile */
private void LoadImagesThread()
{
blocker.StartBlock();
loaderThreadRuning = true;
PicesDataBase.ThreadInit();
blocker.EndBlock();
dbConn = PicesDataBase.GetGlobalDatabaseManagerNewInstance(runLog);
allSipperFiles = (String.IsNullOrEmpty(cruiseName) &&
String.IsNullOrEmpty(stationName) &&
String.IsNullOrEmpty(deploymentNum) &&
String.IsNullOrEmpty(sipperFileName)
);
if (!String.IsNullOrEmpty(sipperFileName))
{
sipperFileNames = new String[1];
sipperFileNames[0] = sipperFileName;
}
else
{
sipperFileNames = dbConn.SipperFileGetList(cruiseName, stationName, deploymentNum);
}
if (selectedImageGroup != null)
{
LoadImagesForSelectedGroup();
}
else
{
if (sipperFileNames != null)
{
for (curSipperFileIdx = 0; (curSipperFileIdx < sipperFileNames.Length) && (!cancelRequested); curSipperFileIdx++)
{
LoadImagesForOneSipperFile(sipperFileNames[curSipperFileIdx]);
}
}
}
blocker.StartBlock();
if (!cancelRequested)
{
doneLoading = true;
}
loaderThreadRuning = false;
blocker.EndBlock();
if (completionEvent != null)
{
completionEvent(this);
}
dbConn.Close();
dbConn = null;
GC.Collect();
PicesDataBase.ThreadEnd();
} /* LoadImagesTread */
} /* SaveSampleImages */
private PicesDataBaseImageList RetrievePlanktonDataBySipperFiles()
{
PicesDataBaseImageList data = new PicesDataBaseImageList();
String[] sipperFileNames = null;
if (String.IsNullOrEmpty(sipperFileName))
{
sipperFileNames = dbConn.SipperFileGetList(cruise, station, deployment);
}
else
{
sipperFileNames = new String[1];
sipperFileNames[0] = sipperFileName;
}
if (sipperFileNames != null)
{
for (int idx = 0; (idx < sipperFileNames.Length) && (!cancelRequested); idx++)
{
String curSipperFileName = sipperFileNames[idx];
backGroundStatus = "Loading[" + (idx + 1).ToString() + " of " + sipperFileNames.Length.ToString() + "] File[" + curSipperFileName + "]";
PicesDataBaseImageList dataThisSipperFile = dbConn.ImagesQuery(null,
curSipperFileName,
mlClass,
classKeyToUse,
probMin, probMax,
sizeMin, sizeMax,
depthMin, depthMax,
0, // Restart ImageId
-1, // limit (Max number of images).
false // false = Do not include Thumbnail.
);
if (dataThisSipperFile != null)
{
imagesLoaded += (uint)dataThisSipperFile.Count;
foreach (PicesDataBaseImage i in dataThisSipperFile)
{
data.Add(i);
}
}
}
}
return(data);
} /* RetrievePlanktonDataBySipperFiles */
} /* CountImagesMissingFeatureData */
private PicesFeatureVectorList SaveFeatureDataBySipperFiles()
{
PicesFeatureVectorList data = new PicesFeatureVectorList();
String[] sipperFileNames = null;
if (String.IsNullOrEmpty(sipperFileName))
{
sipperFileNames = dbConn.SipperFileGetList(cruise, station, deployment);
}
else
{
sipperFileNames = new String[1];
sipperFileNames[0] = sipperFileName;
}
if (sipperFileNames != null)
{
for (int idx = 0; (idx < sipperFileNames.Length) && (!cancelRequested); idx++)
{
String curSipperFileName = sipperFileNames[idx];
backGroundStatus = "Loading[" + (idx + 1).ToString() + " of " + sipperFileNames.Length.ToString() + "] File[" + curSipperFileName + "]";
PicesFeatureVectorList dataThisSipperFile = dbConn.FeatureDataGetOneSipperFile(curSipperFileName, mlClass, classKeyToUse, false);
if (dataThisSipperFile != null)
{
imagesLoaded += (uint)dataThisSipperFile.Count;
uint numFilteredOut = 0;
dataThisSipperFile = FilterFeatureVectorList(dataThisSipperFile, ref numFilteredOut);
imagesFilteredOut += numFilteredOut;
imagesMissingFeatureData += CountImagesMissingFeatureData(dataThisSipperFile);
foreach (PicesFeatureVector fv in dataThisSipperFile)
{
data.Add(fv);
}
}
}
}
return(data);
} /* SaveFeatureDataBySipperFiles */