private Individual createIndividual()
{
var originData = new OriginData
{
Species = CoreConstants.Species.HUMAN,
Population = CoreConstants.Population.ICRP,
Age = new Parameter
{
Value = 30,
Unit = "year(s)",
},
Weight = new Parameter
{
Value = 75,
Unit = "kg",
},
Height = new Parameter
{
Value = 175,
Unit = "cm",
},
Gender = CoreConstants.Gender.MALE
};
var modelOriginData = _originDataMapper.MapToModel(originData, new SnapshotContext()).Result;
var individual = _individualFactory.CreateAndOptimizeFor(modelOriginData);
return(individual);
}
private OriginData originDataFrom(Core.Snapshots.OriginData originData)
{
var coreOriginData = _originDataMapper.MapToModel(originData).Result;
if (coreOriginData.SpeciesPopulation.IsAgeDependent && originData.Age == null)
{
throw new PKSimException(PKSimConstants.Error.ParameterIsRequired(CoreConstants.Parameters.AGE));
}
return(coreOriginData);
}
public Individual DefaultIndividualFor(SpeciesPopulation speciesPopulation)
{
if (!_individualCacheProSpecies.Contains(speciesPopulation))
{
var originDataSnapshot = new OriginData
{
Species = speciesPopulation.Species,
Population = speciesPopulation.Name,
Gender = DefaultGenderFor(speciesPopulation).Name
};
var originData = _originDataMapper.MapToModel(originDataSnapshot).Result;
_individualCacheProSpecies[speciesPopulation] = _individualFactory.CreateStandardFor(originData);
}
return(_individualCacheProSpecies[speciesPopulation]);
}
public Individual DefaultIndividualFor(SpeciesPopulation speciesPopulation)
{
if (!_individualCacheProSpecies.Contains(speciesPopulation))
{
var originDataSnapshot = new OriginData
{
Species = speciesPopulation.Species,
Population = speciesPopulation.Name,
Gender = DefaultGenderFor(speciesPopulation).Name
};
//We do not need to pass any valid snapshot context in this case.
var originData = _originDataMapper.MapToModel(originDataSnapshot, new SnapshotContext()).Result;
_individualCacheProSpecies[speciesPopulation] = _individualFactory.CreateStandardFor(originData);
}
return(_individualCacheProSpecies[speciesPopulation]);
}
private Core.Model.OriginData originDataFrom(OriginData matlabOriginData) => _originDataMapper.MapToModel(matlabOriginData).Result;
private OriginData originDataFrom(Core.Snapshots.OriginData originData)
{
return(_originDataMapper.MapToModel(originData, new SnapshotContext()).Result);
}
private Core.Model.OriginData originDataFrom(OriginData matlabOriginData) => _originDataMapper.MapToModel(matlabOriginData, new SnapshotContext()).Result;