public static void TestDynamicMgf(string fileName)
{
string filePath = Path.Combine(TestContext.CurrentContext.TestDirectory, "DataFiles", fileName);
Mgf staticMgf = Mgf.LoadAllStaticData(filePath);
MgfDynamicData dynamicMgf = new MgfDynamicData(filePath);
foreach (MsDataScan staticScan in staticMgf.GetAllScansList())
{
MsDataScan dynamicScan = dynamicMgf.GetOneBasedScanFromDynamicConnection(staticScan.OneBasedScanNumber);
Assert.That(dynamicScan.OneBasedScanNumber == staticScan.OneBasedScanNumber);
Assert.That(dynamicScan.MsnOrder == staticScan.MsnOrder);
if (!double.IsNaN(dynamicScan.RetentionTime) || !double.IsNaN(staticScan.RetentionTime))
{
Assert.That(dynamicScan.RetentionTime == staticScan.RetentionTime);
}
Assert.That(dynamicScan.Polarity == staticScan.Polarity);
Assert.That(dynamicScan.ScanWindowRange.Minimum == staticScan.ScanWindowRange.Minimum);
Assert.That(dynamicScan.ScanWindowRange.Maximum == staticScan.ScanWindowRange.Maximum);
Assert.That(dynamicScan.ScanFilter == staticScan.ScanFilter);
Assert.That(dynamicScan.NativeId == staticScan.NativeId);
Assert.That(dynamicScan.IsCentroid == staticScan.IsCentroid);
Assert.That(dynamicScan.IsCentroid == staticScan.IsCentroid);
Assert.That(dynamicScan.InjectionTime == staticScan.InjectionTime);
Assert.That(dynamicScan.NoiseData == staticScan.NoiseData);
Assert.That(dynamicScan.IsolationMz == staticScan.IsolationMz);
Assert.That(dynamicScan.SelectedIonChargeStateGuess == staticScan.SelectedIonChargeStateGuess);
Assert.That(dynamicScan.SelectedIonIntensity == staticScan.SelectedIonIntensity);
Assert.That(dynamicScan.SelectedIonMZ == staticScan.SelectedIonMZ);
Assert.That(dynamicScan.DissociationType == staticScan.DissociationType);
Assert.That(dynamicScan.IsolationWidth == staticScan.IsolationWidth);
Assert.That(dynamicScan.OneBasedPrecursorScanNumber == staticScan.OneBasedPrecursorScanNumber);
Assert.That(dynamicScan.SelectedIonMonoisotopicGuessIntensity == staticScan.SelectedIonMonoisotopicGuessIntensity);
Assert.That(dynamicScan.SelectedIonMonoisotopicGuessMz == staticScan.SelectedIonMonoisotopicGuessMz);
if (dynamicScan.IsolationRange != null || staticScan.IsolationRange != null)
{
Assert.That(dynamicScan.IsolationRange.Minimum == staticScan.IsolationRange.Minimum);
Assert.That(dynamicScan.IsolationRange.Maximum == staticScan.IsolationRange.Maximum);
}
Assert.That(dynamicScan.MassSpectrum.XArray.Length == staticScan.MassSpectrum.XArray.Length);
Assert.That(dynamicScan.MassSpectrum.YArray.Length == staticScan.MassSpectrum.YArray.Length);
for (int i = 0; i < staticScan.MassSpectrum.XArray.Length; i++)
{
double staticMz = staticScan.MassSpectrum.XArray[i];
double staticIntensity = staticScan.MassSpectrum.YArray[i];
double dynamicMz = dynamicScan.MassSpectrum.XArray[i];
double dynamicIntensity = dynamicScan.MassSpectrum.YArray[i];
Assert.That(dynamicMz == staticMz);
Assert.That(dynamicIntensity == staticIntensity);
}
}
}
