/// <summary> /// /// </summary> /// <param name="fastaEntry">FASTA entry for the chromosome</param> /// <param name="chrom">chromosome</param> /// <param name="bamFile">path to BAM</param> /// <param name="bins">predefined bins</param> public BinTask(string fastaFile, string chrom, string bamFile, List <GenomicBin> bins) { FastaFile = fastaFile; Chromosome = chrom; Bam = new Isas.Shared.Bam(new Isas.Shared.FileLocation(bamFile)); Bins = bins; }
/// <summary> /// /// </summary> /// <param name="fastaEntry">FASTA entry for the chromosome</param> /// <param name="chrom">chromosome</param> /// <param name="bamFile">path to BAM</param> /// <param name="bins">predefined bins</param> public BinTask(string fastaFile, string chrom, string bamFile, List<GenomicBin> bins) { FastaFile = fastaFile; Chromosome = chrom; Bam = new Isas.Shared.Bam(new Isas.Shared.FileLocation(bamFile)); Bins = bins; }