public long[] FindLargeVariants(int begin, int end)
{
var positions = _intervalArray?.GetAllOverlappingValues(begin, end);
if (positions == null || positions.Length == 0)
{
return(null);
}
return(positions);
}
private ICodingBlock[] GetOverlappingCodingBlocks(IChromosomeInterval chrInterval)
{
UpdateCodingBlockArray(chrInterval.Chromosome.Index);
return(_commonCodingBlockArray?.GetAllOverlappingValues(chrInterval.Start, chrInterval.End));
}
public void GetAllOverlappingValues(int begin, int end, string[] expectedValues)
{
var observedValues = _intervalArray.GetAllOverlappingValues(begin, end);
Assert.Equal(expectedValues, observedValues);
}
