public List <double> ComputeComplex(IGlycan glycan)
{
List <double> massList = new List <double>();
ITableNGlycan nglycan = glycan as ITableNGlycan;
int[] table = nglycan.GetNGlycanTable();
double mass = table[4] * HexNAc + table[8] * Hex + table[12] * Fuc + table[16] * NeuAc + table[20] * NeuGc;
massList.Add(mass);
massList.Add(mass + Hex);
massList.Add(mass + Hex * 2);
massList.Add(mass + Hex * 2 + HexNAc);
massList.Add(mass + Hex * 2 + HexNAc * 2);
return(massList);
}
protected bool IsGlycanMatch(ITableNGlycan glycan, ITableNGlycan parent)
{
if (glycan.GetNGlycanType() != parent.GetNGlycanType())
{
return(false);
}
int[] s1 = glycan.GetNGlycanTable();
int[] s2 = parent.GetNGlycanTable();
for (int i = 0; i < s1.Length; i++)
{
if (s1[i] > s2[i])
{
return(false);
}
}
return(true);
}
public int[] GetNGlycanTable()
{
return(glycan.GetNGlycanTable());
}
