public Simulation CreateFrom(ISimulationSubject simulationSubject, IReadOnlyList <Compound> compounds, ModelProperties modelProperties, Simulation originalSimulation = null)
{
var simulation = createSimulation(simulationSubject.GetType());
//update the used building block in the simulation
if (originalSimulation != null)
{
originalSimulation.UsedBuildingBlocks.Each(simulation.AddUsedBuildingBlock);
}
_simulationBuildingBlockUpdater.UpdateUsedBuildingBlockInSimulationFromTemplate(simulation, simulationSubject, PKSimBuildingBlockType.SimulationSubject);
_simulationBuildingBlockUpdater.UpdateMultipleUsedBuildingBlockInSimulationFromTemplate(simulation, compounds, PKSimBuildingBlockType.Compound);
//set basic properties
if (originalSimulation != null)
{
simulation.UpdateFromOriginalSimulation(originalSimulation);
simulation.Properties = originalSimulation.Properties;
}
//last but not least, update model properties to match new definition (this should be done last as UpdateFromOriginalSimulation resets the model properties)
simulation.ModelProperties = modelProperties;
updateCompoundProperties(simulation);
return(simulation);
}
private void addPopulationBuildingBlockToSimulation(PopulationSimulationImport populationSimulationImport, Population population)
{
_simulationBuildingBlockUpdater.UpdateUsedBuildingBlockInSimulationFromTemplate(populationSimulationImport.PopulationSimulation, population, PKSimBuildingBlockType.SimulationSubject);
}