Esempio n. 1
0
        private static IRingSet toRingSet(IAtomContainer ac, System.Collections.ICollection cycles)
        {
            IRingSet ringSet = ac.Builder.newRingSet();

            System.Collections.IEnumerator cycleIterator = cycles.GetEnumerator();

            while (cycleIterator.MoveNext())
            {
                SimpleCycle cycle = (SimpleCycle)cycleIterator.Current;

                IRing ring = ac.Builder.newRing();

                System.Collections.IList vertices = cycle.vertexList();

                IAtom[] atoms = new IAtom[vertices.Count];
                atoms[0] = (IAtom)vertices[0];
                for (int i = 1; i < vertices.Count; i++)
                {
                    atoms[i] = (IAtom)vertices[i];
                    ring.addElectronContainer(ac.getBond(atoms[i - 1], atoms[i]));
                }
                ring.addElectronContainer(ac.getBond(atoms[vertices.Count - 1], atoms[0]));
                ring.Atoms = atoms;

                ringSet.addAtomContainer(ring);
            }

            return(ringSet);
        }