public static CGEdgeData CGEdgeDataConvert(IGWEdge <CGNodeData, CGEdgeData, CGGraphData> edge)
{
var newData = new CGEdgeData();
newData.Weight = edge.Data.Weight;
return(newData);
}
public static ICRFEdgeData IGWEdgeDataConvert(IGWEdge <ICRFNodeData, ICRFEdgeData, ICRFGraphData> edge)
{
var newData = new CRFEdgeData();
newData.Scores = edge.Data.Scores;
return(newData);
}
public static SGLEdgeData SGLEdgeDataConvert(IGWEdge <SGLNodeData, SGLEdgeData, SGLGraphData> edge)
{
var newData = new SGLEdgeData();
newData.Scores = edge.Data.Scores;
newData.Type = edge.Data.Type;
return(newData);
}
public static IGWNode Neighbour(this IGWNode node, IGWEdge edge)
{
if (edge.Head.GraphId == node.GraphId)
{
return(edge.Foot);
}
return(edge.Head);
}
public static ICRFEdgeData convertEdgeData(IGWEdge <ICRFNodeData, ICRFEdgeData, ICRFGraphData> arg)
{
// scores übernehmen
var newData = new CRFEdgeData();
newData.Scores = arg.Data.Scores;
return(newData);
}
public override double Score(IGWEdge <ICRFNodeData, ICRFEdgeData, ICRFGraphData> edge, int labelHead, int labelFoot)
{
if (labelHead == LabelHead && labelFoot == LabelFoot)
{
if (edge.Data.DiffZellnerScore > LowerBoundary && edge.Data.DiffZellnerScore <= UpperBoundary)
{
return(1.0);
}
}
return(0.0);
}
public static double Score(this IGWEdge <ICRFNodeDataBinary, ICRFEdgeDataBinary, ICRFGraphData> edge, bool state1, bool state2)
{
if (state1)
{
return(state2 ? edge.Data.ScoreTT : edge.Data.ScoreTF);
}
else
{
return(state2 ? edge.Data.ScoreFT : edge.Data.ScoreFF);
}
}
public static double Score(this IGWEdge <ICRFNodeData, ICRFEdgeData, ICRFGraphData> edge, int node1, int label1, int node2, int label2)
{
if (edge.Head.GraphId.Equals(node1))
{
return(edge.Data.Scores[label1, label2]);
}
else
{
return(edge.Data.Scores[label2, label1]);
}
}
public override double Score(IGWEdge <RASACRFNodeData, RASACRFEdgeData, ProteinCRFGraphData> edge, int labelHead, int labelFoot)
{
if ((labelHead == LabelHead && labelFoot == LabelFoot) ||
(labelHead == LabelFoot && labelFoot == LabelHead))
{
if (edge.Data.Diff > LowerBoundary && edge.Data.Diff <= UpperBoundary)
{
return(1.0);
}
}
return(0.0);
}
public static double TempScore(this IGWEdge <ICRFNodeData, ICRFEdgeData, ICRFGraphData> edge)
{
var tempAssignHead = edge.Head.Data.TempAssign;
if (tempAssignHead < 0)
{
return(0.0);
}
var tempAssignFoot = edge.Foot.Data.TempAssign;
if (tempAssignFoot < 0)
{
return(0.0);
}
return(edge.Data.Scores[tempAssignHead, tempAssignFoot]);
}
public override double Score(IGWEdge <ICRFNodeData, ICRFEdgeData, ICRFGraphData> edge, int labelhead, int labelfoot)
{
return(0.0);
}
//public double Score(AgO<int, int> state)
//{
// return Scores[state.Data1, state.Data2];
//}
public static double Score(this IGWEdge <ICRFNodeData, ICRFEdgeData, ICRFGraphData> edge, int state1, int state2)
{
return(edge.Data.Scores[state1, state2]);
}
public abstract double Score(IGWEdge <NodeData, EdgeData, GraphData> edge, int labelhead, int labelfoot);
public static IGWNode <NodeData, EdgeData, GraphData> Neighbour <NodeData, EdgeData, GraphData>(this IGWNode <NodeData, EdgeData, GraphData> node, IGWEdge <NodeData, EdgeData, GraphData> edge)
{
if (edge.Head.GraphId == node.GraphId)
{
return(edge.Foot);
}
return(edge.Head);
}