public async Task GivenRandomContent_WhenStoring_TheServerShouldReturnConflict()
{
await using MemoryStream stream = _recyclableMemoryStreamManager.GetStream();
DicomWebException exception = await Assert.ThrowsAsync <DicomWebException>(() => _client.StoreAsync(new[] { stream }));
Assert.Equal(HttpStatusCode.Conflict, exception.StatusCode);
}
public async Task GivenRetrieveRequestForFrame_WhenResourceIsFound_ThenAuditLogEntriesShouldBeCreated()
{
DicomFile dicomFile = Samples.CreateRandomDicomFileWithPixelData(frames: 1);
var dicomInstance = dicomFile.Dataset.ToInstanceIdentifier();
await _client.StoreAsync(new[] { dicomFile }, dicomInstance.StudyInstanceUid);
await ExecuteAndValidate(
() => _client.RetrieveFramesAsync(dicomInstance.StudyInstanceUid, dicomInstance.SeriesInstanceUid, dicomInstance.SopInstanceUid, frames: new int[] { 1 }),
AuditEventSubType.Retrieve,
$"studies/{dicomInstance.StudyInstanceUid}/series/{dicomInstance.SeriesInstanceUid}/instances/{dicomInstance.SopInstanceUid}/frames/1",
HttpStatusCode.OK);
}
private async Task <DicomDataset> PostDicomFileAsync(ResourceType resourceType, string studyInstanceUid, string seriesInstanceUid = null, string sopInstanceUid = null, DicomDataset dataSet = null)
{
DicomFile dicomFile = null;
switch (resourceType)
{
case ResourceType.Study:
dicomFile = Samples.CreateRandomDicomFile(studyInstanceUid);
break;
case ResourceType.Series:
dicomFile = Samples.CreateRandomDicomFile(studyInstanceUid, seriesInstanceUid);
break;
case ResourceType.Instance:
dicomFile = Samples.CreateRandomDicomFile(studyInstanceUid, seriesInstanceUid, sopInstanceUid);
break;
}
if (dataSet != null)
{
dicomFile.Dataset.AddOrUpdate(dataSet);
}
using (DicomWebResponse <DicomDataset> response = await _client.StoreAsync(new[] { dicomFile }))
{
Assert.Equal(HttpStatusCode.OK, response.StatusCode);
}
return(dicomFile.Dataset);
}
private async Task InternalStoreAsync(IEnumerable <DicomFile> dicomFiles)
{
await _client.StoreAsync(dicomFiles);
foreach (DicomFile dicomFile in dicomFiles)
{
_studiesToClean.Add(dicomFile.Dataset.GetString(DicomTag.StudyInstanceUID));
}
}
public async Task GivenPostDicomRequest_WithAReadOnlyToken_ReturnUnauthorized()
{
if (AuthenticationSettings.SecurityEnabled)
{
DicomFile dicomFile = Samples.CreateRandomDicomFileWithPixelData(frames: 1);
var dicomInstance = dicomFile.Dataset.ToInstanceIdentifier();
IDicomWebClient client = _fixture.GetDicomWebClient(TestApplications.GlobalAdminServicePrincipal, TestUsers.User1);
DicomWebException exception = await Assert.ThrowsAsync <DicomWebException>(
() => client.StoreAsync(new[] { dicomFile }, dicomInstance.StudyInstanceUid));
Assert.Equal(HttpStatusCode.Forbidden, exception.StatusCode);
}
}
private async Task <DicomDataset> PostDicomFileAsync(DicomDataset metadataItems = null)
{
DicomFile dicomFile1 = CreateDicomFile();
if (metadataItems != null)
{
dicomFile1.Dataset.AddOrUpdate(metadataItems);
}
await _client.StoreAsync(new[] { dicomFile1 });
_createdDicomStudies.Add(dicomFile1.Dataset.GetSingleValue <string>(DicomTag.StudyInstanceUID));
return(dicomFile1.Dataset);
}
private static void StoreRetrievedData(DicomFile dicomFile)
{
DicomWebResponse <DicomDataset> response = s_client.StoreAsync(new List <DicomFile>()
{
dicomFile
}).Result;
int statusCode = (int)response.StatusCode;
if (statusCode != 409 && statusCode < 200 && statusCode > 299)
{
throw new HttpRequestException("Store operation failed", null, response.StatusCode);
}
return;
}
private static void StoreRetrievedData(DicomFile dicomFile)
{
DicomWebResponse <DicomDataset> response = client.StoreAsync(new List <DicomFile>()
{
dicomFile
}).Result;
int statusCode = (int)response.StatusCode;
if (statusCode != 409 && statusCode < 200 && statusCode > 299)
{
throw new Exception();
}
return;
}
public async Task GivenInputAndOutputTransferSyntax_WhenRetrieveFrame_ThenServerShouldReturnExpectedContent(string testDataFolder, string mediaType, string transferSyntax)
{
TranscoderTestData transcoderTestData = TranscoderTestDataHelper.GetTestData(testDataFolder);
DicomFile inputDicomFile = await DicomFile.OpenAsync(transcoderTestData.InputDicomFile);
int numberOfFrames = DicomPixelData.Create(inputDicomFile.Dataset).NumberOfFrames;
string studyInstanceUid = inputDicomFile.Dataset.GetString(DicomTag.StudyInstanceUID);
string seriesInstanceUid = inputDicomFile.Dataset.GetString(DicomTag.SeriesInstanceUID);
string sopInstanceUid = inputDicomFile.Dataset.GetString(DicomTag.SOPInstanceUID);
DicomWebResponse <IEnumerable <DicomDataset> > tryQuery = await _client.QueryAsync(
$"/studies/{studyInstanceUid}/series/{seriesInstanceUid}/instances?SOPInstanceUID={sopInstanceUid}");
if (tryQuery.StatusCode == HttpStatusCode.OK)
{
await _client.DeleteStudyAsync(studyInstanceUid);
}
await _client.StoreAsync(new[] { inputDicomFile });
DicomWebResponse <IReadOnlyList <Stream> > response = await _client.RetrieveFramesAsync(
studyInstanceUid : studyInstanceUid,
seriesInstanceUid : seriesInstanceUid,
sopInstanceUid : sopInstanceUid,
mediaType : mediaType,
dicomTransferSyntax : transferSyntax,
frames : GenerateFrames(numberOfFrames),
cancellationToken : _defaultCancellationToken);
Assert.Equal(HttpStatusCode.OK, response.StatusCode);
string byteStreamHash = TranscoderTestDataHelper.GetHashFromStream(response.Value[0]);
Assert.Equal(transcoderTestData.MetaData.OutputFramesHashCode, byteStreamHash);
await _client.DeleteStudyAsync(studyInstanceUid);
}
private static async Task Stow(Message message, CancellationToken token)
{
PatientInstance pI = JsonSerializer.Deserialize <PatientInstance>(Encoding.UTF8.GetString(message.Body));
// 400, 400, 100 - 16MB
// 100, 100, 100 - 1MB
// 100, 100, 50 - 0.5MB
DicomFile dicomFile = Samples.CreateRandomDicomFileWithPixelData(
pI,
rows: 100,
columns: 100,
frames: 50);
DicomWebResponse <DicomDataset> response = await client.StoreAsync(new List <DicomFile>() { dicomFile }, cancellationToken : token);
int statusCode = (int)response.StatusCode;
if (statusCode != 409 && statusCode < 200 && statusCode > 299)
{
throw new HttpRequestException("Stow operation failed", null, response.StatusCode);
}
return;
}
private async Task CreateFile(string studyInstanceUid, string seriesInstanceUid, string sopInstanceUid)
{
DicomFile dicomFile1 = Samples.CreateRandomDicomFile(studyInstanceUid, seriesInstanceUid, sopInstanceUid);
await _client.StoreAsync(new[] { dicomFile1 }, studyInstanceUid);
}
public async Task GivenValidExtendedQueryTags_WhenGoThroughEndToEndScenario_ThenShouldSucceed()
{
// Prepare 3 extended query tags.
// One is private tag on Instance level
// To add private tag, need to add identification code element at first.
DicomTag identificationCodeTag = new DicomTag(0x0407, 0x0010);
DicomElement identificationCodeElement = new DicomLongString(identificationCodeTag, PrivateCreatorName);
DicomTag privateTag = new DicomTag(0x0407, 0x1001, PrivateCreatorName);
AddExtendedQueryTagEntry privateQueryTag = new AddExtendedQueryTagEntry {
Path = privateTag.GetPath(), VR = DicomVRCode.SS, Level = QueryTagLevel.Instance, PrivateCreator = privateTag.PrivateCreator.Creator
};
// One is standard tag on Series level
DicomTag standardTagSeries = DicomTag.ManufacturerModelName;
AddExtendedQueryTagEntry standardTagSeriesQueryTag = new AddExtendedQueryTagEntry {
Path = standardTagSeries.GetPath(), VR = standardTagSeries.GetDefaultVR().Code, Level = QueryTagLevel.Series
};
// One is standard tag on Study level
DicomTag standardTagStudy = DicomTag.PatientSex;
AddExtendedQueryTagEntry standardTagStudyQueryTag = new AddExtendedQueryTagEntry {
Path = standardTagStudy.GetPath(), VR = standardTagStudy.GetDefaultVR().Code, Level = QueryTagLevel.Study
};
AddExtendedQueryTagEntry[] queryTags = new AddExtendedQueryTagEntry[] { privateQueryTag, standardTagSeriesQueryTag, standardTagStudyQueryTag };
// Create 3 test files on same studyUid.
string studyUid = TestUidGenerator.Generate();
string seriesUid1 = TestUidGenerator.Generate();
string seriesUid2 = TestUidGenerator.Generate();
string instanceUid1 = TestUidGenerator.Generate();
string instanceUid2 = TestUidGenerator.Generate();
string instanceUid3 = TestUidGenerator.Generate();
// One is on seriesUid1 and instanceUid1
DicomDataset dataset1 = Samples.CreateRandomInstanceDataset(studyInstanceUid: studyUid, seriesInstanceUid: seriesUid1, sopInstanceUid: instanceUid1);
dataset1.Add(identificationCodeElement);
dataset1.AddOrUpdate(new DicomSignedShort(privateTag, 1));
dataset1.Add(standardTagSeries, "ManufacturerModelName1");
dataset1.Add(standardTagStudy, "0");
// One is on seriesUid1 and instanceUid2
DicomDataset dataset2 = Samples.CreateRandomInstanceDataset(studyInstanceUid: studyUid, seriesInstanceUid: seriesUid1, sopInstanceUid: instanceUid2);
dataset2.Add(identificationCodeElement);
dataset2.AddOrUpdate(new DicomSignedShort(privateTag, 2));
dataset2.Add(standardTagSeries, "ManufacturerModelName2");
dataset2.Add(standardTagStudy, "0");
// One is on seriesUid2 and instanceUid3
DicomDataset dataset3 = Samples.CreateRandomInstanceDataset(studyInstanceUid: studyUid, seriesInstanceUid: seriesUid2, sopInstanceUid: instanceUid3);
dataset3.Add(identificationCodeElement);
dataset3.AddOrUpdate(new DicomSignedShort(privateTag, 3));
dataset3.Add(standardTagSeries, "ManufacturerModelName3");
dataset3.Add(standardTagStudy, "1");
try
{
// Add extended query tags
await _client.AddExtendedQueryTagAsync(queryTags);
try
{
foreach (var queryTag in queryTags)
{
GetExtendedQueryTagEntry returnTag = await(await _client.GetExtendedQueryTagAsync(queryTag.Path)).GetValueAsync();
CompareExtendedQueryTagEntries(queryTag, returnTag);
}
// Upload test files
IEnumerable <DicomFile> dicomFiles = new DicomDataset[] { dataset1, dataset2, dataset3 }.Select(dataset => new DicomFile(dataset));
await _client.StoreAsync(dicomFiles, studyInstanceUid : string.Empty, cancellationToken : default);
// Query on instance for private tag
DicomWebAsyncEnumerableResponse <DicomDataset> queryInstanceResponse = await _client.QueryAsync(new Uri($"/instances?{privateTag.GetPath()}=3", UriKind.Relative), cancellationToken : default);
DicomDataset[] instanceResult = await queryInstanceResponse.ToArrayAsync();
Assert.Single(instanceResult);
Assert.Equal(instanceUid3, instanceResult[0].GetSingleValue <string>(DicomTag.SOPInstanceUID));
// Query on series for standardTagSeries
DicomWebAsyncEnumerableResponse <DicomDataset> querySeriesResponse = await _client.QueryAsync(new Uri($"/series?{standardTagSeries.GetPath()}=ManufacturerModelName2", UriKind.Relative), cancellationToken : default);
DicomDataset[] seriesResult = await querySeriesResponse.ToArrayAsync();
Assert.Single(seriesResult);
Assert.Equal(seriesUid1, seriesResult[0].GetSingleValue <string>(DicomTag.SeriesInstanceUID));
// Query on study for standardTagStudy
DicomWebAsyncEnumerableResponse <DicomDataset> queryStudyResponse = await _client.QueryAsync(new Uri($"/studies?{standardTagStudy.GetPath()}=1", UriKind.Relative), cancellationToken : default);
DicomDataset[] studyResult = await queryStudyResponse.ToArrayAsync();
Assert.Single(studyResult);
Assert.Equal(studyUid, seriesResult[0].GetSingleValue <string>(DicomTag.StudyInstanceUID));
}
finally
{
await _client.DeleteStudyAsync(studyUid);
}
}
finally
{
// Cleanup extended query tags, also verify GetExtendedQueryTagsAsync.
var responseQueryTags = await(await _client.GetExtendedQueryTagsAsync()).GetValueAsync();
foreach (var rTag in responseQueryTags)
{
if (queryTags.Any(tag => tag.Path == rTag.Path))
{
await _client.DeleteExtendedQueryTagAsync(rTag.Path);
}
}
}
}
public async Task GivenInstanceWithFrames_WhenRetrieveRequestForFramesInInstance_ThenServerShouldReturnRequestedFrames()
{
var studyInstanceUid = TestUidGenerator.Generate();
DicomFile dicomFile1 = Samples.CreateRandomDicomFileWithPixelData(studyInstanceUid, frames: 2);
var dicomInstance = dicomFile1.Dataset.ToInstanceIdentifier();
await _client.StoreAsync(new[] { dicomFile1 }, studyInstanceUid);
DicomWebResponse <IReadOnlyList <Stream> > frames = await _client.RetrieveFramesAsync(dicomInstance.StudyInstanceUid, dicomInstance.SeriesInstanceUid, dicomInstance.SopInstanceUid, frames : new[] { 1, 2 });
Assert.NotNull(frames);
Assert.Equal(HttpStatusCode.OK, frames.StatusCode);
Assert.Equal(2, frames.Value.Count);
Assert.Equal(KnownContentTypes.MultipartRelated, frames.Content.Headers.ContentType.MediaType);
AssertPixelDataEqual(DicomPixelData.Create(dicomFile1.Dataset).GetFrame(0), frames.Value[0]);
AssertPixelDataEqual(DicomPixelData.Create(dicomFile1.Dataset).GetFrame(1), frames.Value[1]);
}
public async Task <DicomWebResponse <DicomDataset> > StoreAsync(DicomFile dicomFile, string studyInstanceUid = default, string partitionName = default, CancellationToken cancellationToken = default)
{
EnsureArg.IsNotNull(dicomFile, nameof(dicomFile));
_instanceIds.Add(DicomInstanceId.FromDicomFile(dicomFile, partitionName));
return(await _dicomWebClient.StoreAsync(dicomFile, studyInstanceUid, partitionName, cancellationToken));
}
