public override void FillStubs(IEvolutionState state, IBreedingSource source)
{
// fill the stubs in my stub-pipeline first with my parent source
StubSource.FillStubs(state, source);
// fill subsidiary stubs with my stubpipeline, including my immediate source
base.FillStubs(state, StubSource);
}
public override int Produce(
int min,
int max,
int subpop,
IList <Individual> inds,
IEvolutionState state,
int thread,
IDictionary <string, object> misc)
{
int start = inds.Count;
IBreedingSource s = state.Generation < GenerationSwitch ? Sources[0] : Sources[1];
int total;
if (GenerateMax)
{
if (MaxGeneratable == 0)
{
MaxGeneratable = MaxChildProduction;
}
var n = MaxGeneratable;
if (n < min)
{
n = min;
}
if (n > max)
{
n = max;
}
total = s.Produce(n, n, subpop, inds, state, thread, misc);
}
else
{
total = s.Produce(min, max, subpop, inds, state, thread, misc);
}
// clone if necessary
if (s is SelectionMethod)
{
for (var q = start; q < total + start; q++)
{
inds[q] = (Individual)(inds[q].Clone());
}
}
return(total);
}
public override void FillStubs(IEvolutionState state, IBreedingSource source)
{
for (int x = 0; x < Sources.Length; x++)
{
if (Sources[x] == null) // fill the stub
{
if (source == null)
{
state.Output.Fatal("BreedingPipeline needed to fill a stub, but no BreedingSource was provided to fill it.\n" +
"This is probably because no parent pipeline was a StubPipeline.");
}
Sources[x] = source;
}
else
{
Sources[x].FillStubs(state, source);
}
}
}
//int IBreedingSource.PickRandom(IBreedingSource[] sources, double prob)
//{
// return PickRandom(sources, prob);
//}
#endregion // Probability
public virtual void FillStubs(IEvolutionState state, IBreedingSource source)
{
}
public override void Setup(IEvolutionState state, IParameter paramBase)
{
base.Setup(state, paramBase);
MyBase = paramBase;
var def = DefaultBase;
Likelihood = state.Parameters.GetDoubleWithDefault(paramBase.Push(P_LIKELIHOOD), def.Push(P_LIKELIHOOD), 1.0);
if (Likelihood < 0.0 || Likelihood > 1.0)
{
state.Output.Fatal("Breeding Pipeline likelihood must be a value between 0.0 and 1.0 inclusive",
paramBase.Push(P_LIKELIHOOD),
def.Push(P_LIKELIHOOD));
}
var numsources = NumSources;
if (numsources == DYNAMIC_SOURCES)
{
// figure it from the file
numsources = state.Parameters.GetInt(paramBase.Push(P_NUMSOURCES), def.Push(P_NUMSOURCES), 0);
if (numsources == -1)
{
state.Output.Fatal("Breeding pipeline num-sources value must exist and be >= 0", paramBase.Push(P_NUMSOURCES), def.Push(P_NUMSOURCES));
}
}
else if (numsources <= DYNAMIC_SOURCES) // it's negative
{
throw new InvalidOperationException("In " + this + " numSources() returned < DYNAMIC_SOURCES (that is, < -1)");
}
else
{
if (state.Parameters.ParameterExists(paramBase.Push(P_NUMSOURCES), def.Push(P_NUMSOURCES))) // uh oh
{
state.Output.Warning("Breeding pipeline's number of sources is hard-coded to " + numsources + " yet num-sources was provided: num-sources will be ignored.",
paramBase.Push(P_NUMSOURCES), def.Push(P_NUMSOURCES));
}
}
Sources = new IBreedingSource[numsources];
for (var x = 0; x < Sources.Length; x++)
{
var p = paramBase.Push(P_SOURCE).Push("" + x);
var d = def.Push(P_SOURCE).Push("" + x);
var s = state.Parameters.GetString(p, d);
if (s != null && s.Equals(V_SAME))
{
if (x == 0)
{
// oops
state.Output.Fatal("Source #0 cannot be declared with the value \"same\".", p, d);
}
// else the source is the same source as before
Sources[x] = Sources[x - 1];
}
else if (s != null && s.Equals(V_STUB))
{
Sources[x] = null;
}
else
{
Sources[x] = (IBreedingSource)state.Parameters.GetInstanceForParameter(p, d, typeof(IBreedingSource));
Sources[x].Setup(state, p);
}
}
state.Output.ExitIfErrors();
}