public static bool AreValueEqual(Hatfield.EnviroData.DataProfile.WQ.Models.LabReportSample model, Hatfield.EnviroData.Core.Action domain)
{
var observationResult = domain.FeatureActions.FirstOrDefault()
.Results.FirstOrDefault()
.MeasurementResult;
var observationResultValue = observationResult.MeasurementResultValues.FirstOrDefault();
var unitOfDomain = observationResult.Unit;
var analyteOfDomain = observationResult.Result.Variable;
var siteOfDomain = observationResult.Result.FeatureAction.SamplingFeature.Site;
//var personOfDomain = observationResult.Result.;
//var labOfDomain = domain;
return model.Value == observationResultValue.DataValue && //value are equal
model.DateTime == observationResultValue.ValueDateTime && //result time are equal
AreValueEqual(model.Site, siteOfDomain) && //site are equal
AreValueEqual(model.Unit, unitOfDomain) && //unit are equal
//AreValueEqual(model.ImportBy, personOfDomain) && //importer person are equal
//AreValueEqual(model.Lab, labOfDomain) && //lab are equal
AreValueEqual(model.Analyte, analyteOfDomain);//analyte are equal
}
public static IEnumerable<ChemistryDataEditViewModel> MapActionToChemistryFileEditViewModel(Hatfield.EnviroData.Core.Action source, IDataVersioningHelper versioningHelper)
{
var relatedChemistryAction = source.RelatedActions.Where(x => x.CV_RelationshipType.Name == "Is related to");
var results = new List<ChemistryDataEditViewModel>();
if (relatedChemistryAction == null || !relatedChemistryAction.Any())
{
return null;
}
foreach (var relationAction in relatedChemistryAction)
{
var latestRelationAction = versioningHelper.GetLatestVersionActionData(relationAction.Action1);
var featureActions = latestRelationAction.FeatureActions;
if (featureActions != null)
{
foreach (var featureAction in featureActions)
{
var measurementResults = from result in featureAction.Results
from measurementResultValue in result.MeasurementResult.MeasurementResultValues
select new ChemistryDataEditViewModel { Id = relationAction.Action1.ActionID,
ChemistryDataValue = MapChemistryFileData(relationAction.Action1, result, measurementResultValue)
};
results.AddRange(measurementResults);
}
}
}
return results;
}
public static IEnumerable<SampleFileData> MapActionToSampleFileData(Hatfield.EnviroData.Core.Action source)
{
var result = new List<SampleFileData> { };
foreach (var featureAction in source.FeatureActions)
{
var samplingActionResults = featureAction.Results;
if (samplingActionResults != null)
{
foreach (var samplingActionResult in samplingActionResults)
{
var sampleFileData = MapSampleFileData(featureAction.Action, samplingActionResult);
if (sampleFileData != null)
{
result.Add(sampleFileData);
}
}
}
}
return result;
}
public void GetProcessingLevelTest(Hatfield.EnviroData.DataProfile.WQ.Models.ProcessingLevel levelToTest, string actualLevelCode)
{
var context = MockDbContext();
var foundProcessingLevel = ProcessingLevelHelper.GetOdm2ProcessingLevel(levelToTest, context);
Assert.NotNull(foundProcessingLevel);
Assert.AreEqual(actualLevelCode, foundProcessingLevel.ProcessingLevelCode);
}
public static bool AreValueEqual(Hatfield.EnviroData.DataProfile.WQ.Models.Unit model, Hatfield.EnviroData.Core.Unit domain)
{
if (model == null || domain == null)
{
return false;
}
return model.Name == domain.UnitsName;
}
public static bool AreValueEqual(Hatfield.EnviroData.DataProfile.WQ.Models.Lab model, Hatfield.EnviroData.Core.Organization domain)
{
if (model == null || domain == null)
{
return false;
}
return string.Equals(model.Name, domain.OrganizationName, StringComparison.InvariantCulture);
}
public static bool AreValueEqual(Hatfield.EnviroData.DataProfile.WQ.Models.Analyte model, Hatfield.EnviroData.Core.Variable domain)
{
if (model == null || domain == null)
{
return false;
}
return string.Equals(model.Name, domain.VariableCode, StringComparison.InvariantCulture);
}
public static ProcessingLevel GetOdm2ProcessingLevel(Hatfield.EnviroData.DataProfile.WQ.Models.ProcessingLevel level, ODM2Entities dbContext)
{
var foundLevel = dbContext.ProcessingLevels.FirstOrDefault(x => x.ProcessingLevelCode == level.ToString());
if(foundLevel == null)
{
throw new KeyNotFoundException(string.Format("System can not find matched processing level for {0}", level));
}
return foundLevel;
}
public static bool AreValueEqual(Hatfield.EnviroData.DataProfile.WQ.Models.Person model, Hatfield.EnviroData.Core.Person domain)
{
if (model == null || domain == null)
{
return false;
}
return string.Equals(model.FirstName, domain.PersonFirstName, StringComparison.InvariantCulture) &&
string.Equals(model.MiddleName, domain.PersonMiddleName, StringComparison.InvariantCulture) &&
string.Equals(model.LastName, domain.PersonLastName, StringComparison.InvariantCulture);
}
public static bool AreValueEqual(Hatfield.EnviroData.DataProfile.WQ.Models.Site model, Hatfield.EnviroData.Core.Site domain)
{
if(model == null || domain == null)
{
return false;
}
var dataAreTheSame = (domain.Latitude == model.Latitude) &&
(domain.Longitude == model.Longitude) &&
(domain.SamplingFeature != null) &&
(domain.SamplingFeature.SamplingFeatureName == model.Name);
return dataAreTheSame;
}
public int GetSubVersionCountOfAction(Hatfield.EnviroData.Core.Action originVersionActionData)
{
var numberOfVersion = 1;
var childVersion = GetNextVersionActionData(originVersionActionData);
while (childVersion != null)
{
numberOfVersion++;
childVersion = GetNextVersionActionData(childVersion);
}
return numberOfVersion;
}
private IQualityCheckingResult GenerateCorrectSampleMatrixTypeDataNewVersion(Hatfield.EnviroData.Core.Action sampleActionData,
StringCompareCheckingRule rule)
{
var newVersionOfData = CorrectSampleMatrixTypeData(sampleActionData, rule);
var relationActionOfNewVersion = new RelatedAction();
relationActionOfNewVersion.Action = sampleActionData;
relationActionOfNewVersion.Action1 = newVersionOfData;
relationActionOfNewVersion.RelationshipTypeCV = QualityAssuranceConstants.SubVersionRelationCVType;
var relationShipCV = _relationShipTypeCVRepository.GetAll()
.Where(x => x.Name == QualityAssuranceConstants.SubVersionRelationCVType)
.FirstOrDefault();
relationActionOfNewVersion.CV_RelationshipType = relationShipCV;
sampleActionData.RelatedActions.Add(relationActionOfNewVersion);
return new QualityCheckingResult("Create new version for correction data.", false, QualityCheckingResultLevel.Info);
}
public Hatfield.EnviroData.Core.Action CloneActionData(Hatfield.EnviroData.Core.Action previousVersionAction)
{
var clonedAction = new Hatfield.EnviroData.Core.Action();
//clone value in the root action object
clonedAction.ActionTypeCV = previousVersionAction.ActionTypeCV;
clonedAction.CV_ActionType = previousVersionAction.CV_ActionType;
clonedAction.MethodID = previousVersionAction.MethodID;
clonedAction.Method = previousVersionAction.Method;
clonedAction.BeginDateTime = previousVersionAction.BeginDateTime;
clonedAction.BeginDateTimeUTCOffset = previousVersionAction.BeginDateTimeUTCOffset;
clonedAction.EndDateTime = previousVersionAction.EndDateTime;
clonedAction.EndDateTimeUTCOffset = previousVersionAction.EndDateTimeUTCOffset;
clonedAction.ActionDescription = previousVersionAction.ActionDescription;
clonedAction.ActionFileLink = previousVersionAction.ActionFileLink;
clonedAction.ActionBies = CloneActionBies(previousVersionAction, clonedAction);
clonedAction.FeatureActions = CloneFeatureActions(previousVersionAction, clonedAction);
return clonedAction;
}
public DomainBuildResult Build(Hatfield.EnviroData.DataProfile.WQ.Models.WQProfileEntity entity, Hatfield.EnviroData.Core.ODM2Entities dbContext)
{
var data = (Hatfield.EnviroData.DataProfile.WQ.Models.Site)entity;
Hatfield.EnviroData.Core.Site domain = null;
System.Data.Entity.EntityState state = EntityState.Unchanged;
if(data == null)
{
throw new NullReferenceException("System fail to build domain on null entity.");
}
if (data.Id > 0)
{
domain = dbContext.Sites.Where(x => x.SamplingFeatureID == data.Id).FirstOrDefault();
}
//data has not change, return the data in the database
if (!IsDataDirty(data, domain))
{
return new DomainBuildResult(true, domain, EntityState.Unchanged);
}
//data is dirty
if (domain == null)
{
domain = new Core.Site();
state = EntityState.Added;
}
else
{
state = EntityState.Modified;
}
domain.Latitude = data.Latitude.HasValue ? data.Latitude.Value : domain.Latitude;
domain.Longitude = data.Longitude.HasValue ? data.Longitude.Value : domain.Longitude;
domain.SamplingFeature.SamplingFeatureName = data.Name;
var result = new DomainBuildResult(true, domain, state);
return result;
}
private static SampleFileData MapSampleFileData(Hatfield.EnviroData.Core.Action actionData, Result sampleResultDomain)
{
if (sampleResultDomain != null)
{
var sampleFileData = new SampleFileData();
sampleFileData.SampledDateTime = sampleResultDomain.ResultDateTime;
try
{
sampleFileData.LabName = actionData.Method.Organization.OrganizationName;
}
catch (NullReferenceException)
{
sampleFileData.LabName = null;
}
//Map data from extension properties
sampleFileData = MapFromExtensionProperties(sampleFileData, sampleResultDomain.ResultExtensionPropertyValues);
return sampleFileData;
}
else
{
return null;
}
}
private ICollection<FeatureAction> CloneFeatureActions(Hatfield.EnviroData.Core.Action previousVersionAction,
Hatfield.EnviroData.Core.Action newVersionAction)
{
if (previousVersionAction.FeatureActions == null)
{
return null;
}
else
{
var newVersionFeatureActions = new List<FeatureAction>();
foreach(var featureAction in previousVersionAction.FeatureActions)
{
var newFeatureAction = new FeatureAction();
newFeatureAction.Action = newVersionAction;
newFeatureAction.SamplingFeatureID = featureAction.SamplingFeatureID;
newFeatureAction.SamplingFeature = featureAction.SamplingFeature;
newFeatureAction.Results = CloneResults(featureAction, newFeatureAction);
newVersionFeatureActions.Add(newFeatureAction);
}
return newVersionFeatureActions;
}
}
private ICollection<ActionBy> CloneActionBies(Hatfield.EnviroData.Core.Action previousVersionAction,
Hatfield.EnviroData.Core.Action newVersionAction)
{
if (previousVersionAction.ActionBies == null)
{
return null;
}
else
{
var clonedNewActionBies = new List<ActionBy>();
foreach(var actionByInPreviousVersion in previousVersionAction.ActionBies)
{
var newActionBy = new ActionBy();
newActionBy.Action = newVersionAction;
newActionBy.Affiliation = actionByInPreviousVersion.Affiliation;
newActionBy.AffiliationID = actionByInPreviousVersion.AffiliationID;
newActionBy.IsActionLead = actionByInPreviousVersion.IsActionLead;
newActionBy.RoleDescription = actionByInPreviousVersion.RoleDescription;
clonedNewActionBies.Add(newActionBy);
}
return clonedNewActionBies;
}
}
private static ChemistryFileData MapChemistryFileData(Hatfield.EnviroData.Core.Action action, Result result, MeasurementResultValue measurementResultValue)
{
var chemistryFileData = new ChemistryFileData();
chemistryFileData.ExtractionDate = action.BeginDateTime;
chemistryFileData.AnalysedDate = action.EndDateTime.HasValue ? action.EndDateTime.Value : DateTime.MinValue;
chemistryFileData.Result = measurementResultValue.DataValue;
chemistryFileData.ResultUnit = result.MeasurementResult.Unit.UnitsName;
chemistryFileData.OriginalChemName = result.Variable.VariableDefinition;
chemistryFileData.ChemCode = result.Variable.VariableCode;
chemistryFileData.MethodName = action.Method.MethodName;
chemistryFileData.MethodType = action.Method.MethodDescription;
var propertyValueDictionary = result.ResultExtensionPropertyValues.ToDictionary(x => x.ExtensionProperty.PropertyName, x => x.PropertyValue);
chemistryFileData.SampleCode = propertyValueDictionary.ContainsKey(ESDATChemistryConstants.ResultExtensionPropertyValueKeySampleCode) ?
propertyValueDictionary[ESDATChemistryConstants.ResultExtensionPropertyValueKeySampleCode] :
string.Empty;
chemistryFileData.Prefix = propertyValueDictionary.ContainsKey(ESDATChemistryConstants.ResultExtensionPropertyValueKeyPrefix) ?
propertyValueDictionary[ESDATChemistryConstants.ResultExtensionPropertyValueKeyPrefix] :
string.Empty;
chemistryFileData.TotalOrFiltered = propertyValueDictionary.ContainsKey(ESDATChemistryConstants.ResultExtensionPropertyValueKeyTotalOrFiltered) ?
propertyValueDictionary[ESDATChemistryConstants.ResultExtensionPropertyValueKeyTotalOrFiltered] :
string.Empty;
chemistryFileData.ResultType = propertyValueDictionary.ContainsKey(ESDATChemistryConstants.ResultExtensionPropertyValueKeyResultType) ?
propertyValueDictionary[ESDATChemistryConstants.ResultExtensionPropertyValueKeyResultType] :
string.Empty;
chemistryFileData.EQL = propertyValueDictionary.ContainsKey(ESDATChemistryConstants.ResultExtensionPropertyValueKeyEQL) ?
MappingHelper.ToNullableDouble(propertyValueDictionary[ESDATChemistryConstants.ResultExtensionPropertyValueKeyEQL]) :
null;
chemistryFileData.EQLUnits = propertyValueDictionary.ContainsKey(ESDATChemistryConstants.ResultExtensionPropertyValueKeyEQLUnits) ?
propertyValueDictionary[ESDATChemistryConstants.ResultExtensionPropertyValueKeyEQLUnits] :
string.Empty;
chemistryFileData.Comments = propertyValueDictionary.ContainsKey(ESDATChemistryConstants.ResultExtensionPropertyValueKeyComments) ? propertyValueDictionary[ESDATChemistryConstants.ResultExtensionPropertyValueKeyComments] : string.Empty;
chemistryFileData.UCL = propertyValueDictionary.ContainsKey(ESDATChemistryConstants.ResultExtensionPropertyValueKeyUCL) ? MappingHelper.ToNullableDouble(propertyValueDictionary[ESDATChemistryConstants.ResultExtensionPropertyValueKeyUCL]) : null;
chemistryFileData.LCL = propertyValueDictionary.ContainsKey(ESDATChemistryConstants.ResultExtensionPropertyValueKeyLCL) ? MappingHelper.ToNullableDouble(propertyValueDictionary[ESDATChemistryConstants.ResultExtensionPropertyValueKeyLCL]) : null;
return chemistryFileData;
}
public WaterQualityDataProfile(Hatfield.EnviroData.Core.ODM2Entities dbContext)
{
_dbContext = dbContext;
}
private Hatfield.EnviroData.Core.Action CorrectSampleMatrixTypeData(Hatfield.EnviroData.Core.Action sampleActionData,
StringCompareCheckingRule rule)
{
var newVersionOfData = _dataVersioningHelper.CloneActionData(sampleActionData);
foreach (var featureAction in newVersionOfData.FeatureActions)
{
foreach(var result in featureAction.Results)
{
foreach(var extension in result.ResultExtensionPropertyValues)
{
if (extension.ExtensionProperty.PropertyName == ESDATSampleCollectionConstants.ResultExtensionPropertyValueKeyMatrixType)
{
extension.PropertyValue = rule.CorrectionValue;
}
}
}
}
return newVersionOfData;
}
private IQualityCheckingResult IsSampleMatrixTypeDataMeetQualityCheckingRule(Hatfield.EnviroData.Core.Action sampleActionData,
StringCompareCheckingRule rule)
{
if (sampleActionData == null || sampleActionData.FeatureActions == null || !sampleActionData.FeatureActions.Any())
{
return new QualityCheckingResult("No results found for the sample action.", false, QualityCheckingResultLevel.Info);
}
var sampleResults = from featureAction in sampleActionData.FeatureActions
from result in featureAction.Results
where featureAction.SamplingFeature.SamplingFeatureTypeCV == QualityAssuranceConstants.SiteSampleFeatureTypeCV
select result;
if (sampleResults == null || !sampleResults.Any())
{
return new QualityCheckingResult("No results found for the sample action.", false, QualityCheckingResultLevel.Info);
}
var resultStringBuilder = new StringBuilder();
var needCorrection = false;
foreach(var result in sampleResults)
{
var sampleMatrixExtension = result.ResultExtensionPropertyValues
.Where(x => x.ExtensionProperty.PropertyName ==
ESDATSampleCollectionConstants.ResultExtensionPropertyValueKeyMatrixType)
.FirstOrDefault();
if (sampleMatrixExtension == null)
{
resultStringBuilder.AppendLine("Sample Result: " + ResultToString(result) + " does not contain sample matrix data.");
}
else
{
var stringCompareOption = rule.IsCaseSensitive ? StringComparison.Ordinal : StringComparison.OrdinalIgnoreCase;
if (string.Equals(sampleMatrixExtension.PropertyValue, rule.ExpectedValue, stringCompareOption))
{
resultStringBuilder.AppendLine(
string.Format(validSampleMatrixResultFormat, ResultToString(result))
);
}
else
{
resultStringBuilder.AppendLine(
string.Format(invalidSampleMatrixResultFormat,
ResultToString(result),
sampleMatrixExtension.PropertyValue,
rule.ExpectedValue)
);
needCorrection = true;
}
}
}
var qcResult = new QualityCheckingResult(resultStringBuilder.ToString(), needCorrection, QualityCheckingResultLevel.Info);
return qcResult;
}
