public static bool Put(DicomPatientData person)
{
string key = person.PatientKey;
bool ok = true;
using (var outStream = new MemoryStream()) {
Serializer.Serialize <DicomPatientData>(outStream, person);
ok = dbClientDicomPatients.Update(key, outStream.ToArray());
}
if (ok)
{
dbClientUpdates1.InsertAutoIncrement(DB_DICOMPATIENTS, StringToolkit.GetBytes(key));
byte[] byteGps = dbClientGpsFiles.Get(key);
if ((byteGps == null) || (byteGps.Length == 0))
{
// it doesn't exist, insert it
PatientGPSFileList gps = new PatientGPSFileList {
EntryTimestamp = DateTime.Now.Ticks
};
using (var outStream = new MemoryStream()) {
Serializer.Serialize <PatientGPSFileList>(outStream, gps);
ok &= dbClientGpsFiles.Create(key, outStream.ToArray());
}
if (ok)
{
dbClientUpdates1.InsertAutoIncrement(DB_GPSFILES, StringToolkit.GetBytes(key));
}
}
return(ok);
}
return(false);
}
public void ParseResponse(string findscu, string modality)
{
bool runFindscu = false;
if (String.IsNullOrWhiteSpace(AET))
{
// before trying the default FINDSCU, find out if there are AE titles in the DB
IEnumerator <KeyVal> aetitles = dbClientDeviceAETitles.GetEnumerator();
while (aetitles.MoveNext())
{
DicomDeviceAETitle aetitle = GetAETitle(Encoding.ASCII.GetString(aetitles.Current.Key));
if (aetitle != null && !String.IsNullOrWhiteSpace(aetitle.DeviceAETitle))
{
AET = aetitle.DeviceAETitle;
runFindscu |= RunFindscu(findscu, modality);
if (runFindscu)
{
break;
}
}
}
}
else
{
// call it with the given AE title
runFindscu |= RunFindscu(findscu, modality);
}
if (!runFindscu)
{
// no AE titles in DB or the call to findscu simply failed
// try the default AE title
AET = CALLING_DEFAULT;
runFindscu = RunFindscu(findscu, modality);
}
if (!runFindscu)
{
// if there is still an error with the default AE title
Logger.WriteMsg(LogSeverity.Error, "Failed calling findscu with default AE title.");
return;
}
List <DicomPatientData> persons = ParseXml("out.xml", out List <Patient> patients);
Logger.WriteMsg(LogSeverity.Info, $"findscu retrieved {persons.Count} patients");
for (int i = 0; i < patients.Count; i++)
{
DicomPatientData p = persons[i];
Put(p);
Put(patients[i]);
}
/* Read back
* foreach (DicomPatientData p in persons) {
* DicomPatientData person = (DicomPatientData)Get(p.PatientKey, false);
* }
* foreach (Patient p in patients) {
* Patient patient = (Patient)Get(p.GetFallbackKey().ToUpper(), true);
* }
*/
}
private List <DicomPatientData> ParseXml(string xmlfile, out List <Patient> patients)
{
var doc = new XmlDocument();
doc.Load(xmlfile);
var dicomPatients = new List <DicomPatientData>();
patients = new List <Patient>();
XmlNodeList nodes = doc.DocumentElement.SelectNodes("/responses/data-set");
foreach (XmlNode node in nodes)
{
string patientFirstName = null, patientLastName = null, patientId = null,
patientBirthDate = null, patientSex = null, characterSet = null;
string transliteratedPatientFirstName = null, transliteratedPatientLastName = null;
TimeParameter tp = null;
TRICS.Planner.Model.Common.Gender gender = TRICS.Planner.Model.Common.Gender.Unknown;
bool transliterationOk = false;
foreach (XmlNode elem in node.SelectNodes("element"))
{
var el = elem.Attributes.GetNamedItem("name");
if (el.InnerText.StartsWith("PatientName"))
{
var patientName = elem.InnerText;
var group1 = patientName.Split('=')[0];
string converted = GetConvertedString(group1);
if (converted != null)
{
transliterationOk = true;
var namePieces = group1.Split('^');
if (namePieces.Length == 1)
{
// just the last name is given
patientLastName = namePieces[0];
}
if (namePieces.Length >= 2)
{
patientLastName = namePieces[0];
patientFirstName = namePieces[1];
}
var transliteratedPieces = converted.Split('^');
if (transliteratedPieces.Length == 1)
{
// just the last name is given
transliteratedPatientLastName = transliteratedPieces[0];
}
if (transliteratedPieces.Length >= 2)
{
transliteratedPatientLastName = transliteratedPieces[0];
transliteratedPatientFirstName = transliteratedPieces[1];
}
}
}
else if (el.InnerText.StartsWith("PatientID"))
{
patientId = elem.InnerText;
}
else if (el.InnerText.StartsWith("PatientBirthDate"))
{
if (elem.InnerText.Length >= 8)
{
tp = new TimeParameter {
Year = Int32.Parse(elem.InnerText.Substring(0, 4)),
Month = Int32.Parse(elem.InnerText.Substring(4, 2)),
Day = Int32.Parse(elem.InnerText.Substring(6, 2))
};
var year = Int32.Parse(elem.InnerText.Substring(0, 4));
var month = Int32.Parse(elem.InnerText.Substring(4, 2));
var day = Int32.Parse(elem.InnerText.Substring(6, 2));
patientBirthDate = day + "/" + month + "/" + year;
}
}
else if (el.InnerText.StartsWith("PatientSex"))
{
if (String.IsNullOrWhiteSpace(elem.InnerText))
{
gender = TRICS.Planner.Model.Common.Gender.Unknown;
}
else
{
if (elem.InnerText.StartsWith("M"))
{
gender = TRICS.Planner.Model.Common.Gender.Male;
}
else if (elem.InnerText.StartsWith("F"))
{
gender = TRICS.Planner.Model.Common.Gender.Female;
}
else
{
gender = TRICS.Planner.Model.Common.Gender.Any;
}
}
patientSex = elem.InnerText;
}
else if (el.InnerText.StartsWith("SpecificCharacterSet"))
{
characterSet = elem.InnerText;
}
}
if (transliterationOk)
{
// even if transliteration succeeds, check the character set
if (!String.IsNullOrWhiteSpace(characterSet))
{
// check if we support the first alphabet given
string alphabet = characterSet.Split('\\')[0].Trim();
if (alphabet.Count() > 0)
{
if (!supportedAplhabets.Contains(alphabet))
{
// alphabet not supported, so we reject this patient altogheter
transliterationOk = false;
}
} // else it is the default ASCII
}
if (transliterationOk)
{
Patient patient = new Patient {
ChartNumber = patientId,
LastName = transliteratedPatientLastName,
FirstName = transliteratedPatientFirstName,
Birthday = tp,
Gender = gender
};
patient.Birthday.UserFormat = "dd/MM/yyyy";
patients.Add(patient);
if (String.IsNullOrWhiteSpace(characterSet))
{
// in case we don't have a SpecificCharacterSet from findscu
// and the transliterated names don't coincide with the original ones,
// we need to specify UTF8 as character set, since the default ASCII won't do
if (
(
(transliteratedPatientFirstName != null) &&
!transliteratedPatientFirstName.Equals(patientFirstName, StringComparison.InvariantCultureIgnoreCase)
) ||
(
(transliteratedPatientLastName != null) &&
!transliteratedPatientLastName.Equals(patientLastName, StringComparison.InvariantCultureIgnoreCase)
)
)
{
characterSet = SupportedCharacterSets.UTF8;
}
}
DicomPatientData person = new DicomPatientData {
Identity = new DicomWorkItem {
PatientLastName = patientLastName,
PatientFirstName = patientFirstName,
PatientID = patientId,
PatientBirthDate = patientBirthDate,
PatientSex = patientSex,
SpecificCharacterSet = characterSet
},
PatientKey = patient.GetFallbackKey().ToUpper()
};
dicomPatients.Add(person);
}
else
{
Logger.WriteMsg(LogSeverity.Warning, $"Given character set {characterSet} not supported");
}
}
else
{
Logger.WriteMsg(LogSeverity.Warning, $"Can't transliterate patient with ID {patientId}");
}
}
return(dicomPatients);
}
