public static void WithSeries(this IEnumerable<CFindResponse> cFinds, DICOMSCU scu, Entity daemon)
{
var iods = cFinds.Where(r => r.Status == (ushort)Status.PENDING)
.Where(r => r.HasData)
.Where(r => r.Data.Elements.Any(e => e.Tag == TagHelper.STUDY_INSTANCE_UID))
.Where(r => !string.IsNullOrEmpty(r.Data.Elements.First(e => e.Tag == TagHelper.STUDY_INSTANCE_UID).DData as string))
.Select(r => r.GetIOD())
.ToList();
iods.ForEach(i=>i.QueryLevel = QueryLevel.SERIES);
foreach (var iod in iods)
{
var req = new CFindRequest(iod, Root.STUDY);
var seriesUids = scu.GetResponse(req, daemon)
.Where(r => r.Status == (ushort)Status.PENDING)
.Where(r => r.HasData)
.Where(r => r.Data.Elements.Any(e => e.Tag == TagHelper.SERIES_INSTANCE_UID))
.Select(r => new
{
// Study = study,
Series = r.Data.GetSelector().SeriesInstanceUID.Data,
Modality = r.Data.GetSelector().Modality.Data
})
.ToList();
System.Console.Write("");
}
}
static void Main(string[] args)
{
var process = Process.GetCurrentProcess();
string fullPath = Path.GetDirectoryName(process.MainModule.FileName);
var me = Entity.CreateLocal("DCMGRBC", 51167);
var scu = new DICOMSCU(me);
var path = fullPath + @"\temp\";
var scpEntity = Entity.CreateLocal("DCMGRB2", 50401);
var scp = new FileWriterSCP(scpEntity, path);
scp.SupportedAbstractSyntaxes = AbstractSyntax.ALL_RADIOTHERAPY_STORAGE;
scp.ListenForIncomingAssociations(true);
var logger = new ConsoleLogger(scp.Logger, ConsoleColor.White);
try
{
using (var app = vapi.Application.CreateApplication(null, null))
{
Execute(app, daemon, scu, scp, path);
}
}
catch (Exception e)
{
System.Windows.Forms.MessageBox.Show(e.ToString(), "Error", System.Windows.Forms.MessageBoxButtons.OK, System.Windows.Forms.MessageBoxIcon.Error);
}
}
/// <summary>
/// This tutorial is outlined in chapter 4 of Scripting in RT for Physicists (C-Store)
/// </summary>
public static void Run()
{
//Store the details of the daemon (Ae Title, IP, port)
var daemon = new Entity("PHYSX_DICOM", "10.22.86.64", 51402);
//Store the details of the client (Ae Title, port) -> IP address is determined by CreateLocal() method
var local = Entity.CreateLocal("DICOMEC1", 9999);
//Set up a client (DICOM SCU = Service Class User)
var client = new DICOMSCU(local);
var storer = client.GetCStorer(daemon);
var desktopPath = Environment.GetFolderPath(Environment.SpecialFolder.Desktop);
var storagePath = Path.Combine(desktopPath, "DICOM Storage");
ushort msgId = 1;
var dcmFiles = Directory.GetFiles(storagePath);
foreach (var path in dcmFiles)
{
//Reads DICOM object into memory
var dcm = DICOMObject.Read(path);
var response = storer.SendCStore(dcm, ref msgId);
//Write results to console
Console.WriteLine($"DICOM C-Store from {local.AeTitle} => " +
$"{daemon.AeTitle} @{daemon.IpAddress}:{daemon.Port}:" +
$"{(Status)response.Status}");
}
Console.Read(); //Stop here
}
private void echoButton_Click(object sender, RoutedEventArgs e)
{
// Store the details of the daemon (Ae Title , IP , port )
var daemon = new Entity(DaemonTitleTextBox.Text, DaemonIpTextBox.Text, int.Parse(DaemonPortTextBox.Text));
// Store the details of the client (Ae Title , port ) -> IP address is determined by CreateLocal() method
var local = Entity.CreateLocal(AEtitleTextBox.Text, int.Parse(AEportTextBox.Text));
// Set up a client ( DICOM SCU = Service Class User )
var client = new DICOMSCU(local);
var storer = client.GetCStorer(daemon);
//ushort msgId = 1;
var canPing = client.Ping(daemon);
if (canPing)
{
echoButton.Background = System.Windows.Media.Brushes.LawnGreen;
ShowLogMsg("\nImport is possible. Echo to Daemon succeeded.");
ProgressTextBlock.Text = "Echo succeeded. Press Start to begin Import.";
}
else
{
echoButton.Background = System.Windows.Media.Brushes.PaleVioletRed;
ShowLogMsg("\nNo import is possible. Echo to Daemon failed.");
ProgressTextBlock.Text = "Echo failed. Import will also fail.";
}
}
public static void WithSeries(this IEnumerable <CFindResponse> cFinds, DICOMSCU scu, Entity daemon)
{
var iods = cFinds.Where(r => r.Status == (ushort)Status.PENDING)
.Where(r => r.HasData)
.Where(r => r.Data.Elements.Any(e => e.Tag == TagHelper.STUDY_INSTANCE_UID))
.Where(r => !string.IsNullOrEmpty(r.Data.Elements.First(e => e.Tag == TagHelper.STUDY_INSTANCE_UID).DData as string))
.Select(r => r.GetIOD())
.ToList();
iods.ForEach(i => i.QueryLevel = QueryLevel.SERIES);
foreach (var iod in iods)
{
var req = new CFindRequest(iod, Root.STUDY);
var seriesUids = scu.GetResponse(req, daemon)
.Where(r => r.Status == (ushort)Status.PENDING)
.Where(r => r.HasData)
.Where(r => r.Data.Elements.Any(e => e.Tag == TagHelper.SERIES_INSTANCE_UID))
.Select(r => new
{
// Study = study,
Series = r.Data.GetSelector().SeriesInstanceUID.Data,
Modality = r.Data.GetSelector().Modality.Data
})
.ToList();
System.Console.Write("");
}
}
static void Main(string[] args)
{
var path = @"\\hnas1-users\USERS\rcardan\Desktop\ToSend\CT.1.2.246.352.71.3.173326327737.18364155.20171204090851.dcm";
var scu = new DICOMSCU(Entity.CreateLocal("DICOMAnonSCU", 11122));
var cStorer = new CStorer(scu, Entity.CreateLocal("DVTK_STR_SCP", 104));
var dcm = DICOMObject.Read(path);
ushort msg = 1;
scu.Logger.LogRequested += Logger_LogRequested;
var resp = cStorer.SendCStore(dcm, ref msg);
Thread.Sleep(2000);
scu = new DICOMSCU(Entity.CreateLocal("DVTK_STRC_SCU", 115));
var verifier = new StorageVerifier(scu, Entity.CreateLocal("DVTK_STRC_SCP", 105));
var results = verifier.VerifyStorage(new Dictionary <string, string>()
{
{ dcm.GetSelector().SOPClassUID.Data, dcm.GetSelector().SOPInstanceUID.Data }
}, 10000);
Console.Read();
//var scp = new DICOMSCP(Entity.CreateLocal("DVTK_STR_SCP", 104));
//scp.DIMSEService.CStoreService.CStorePayloadAction = new Func<DICOMObject, Association, bool>((d, asc) =>
//{
// return true;
//});
//scp.SupportedAbstractSyntaxes = AbstractSyntax.ALL_RADIOTHERAPY_STORAGE;
//scp.SupportedAbstractSyntaxes.Add(AbstractSyntax.StorageCommitment_Push);
//scp.ListenForIncomingAssociations(true);
//scp.Logger.LogRequested += Logger_LogRequested;
//Console.Read();
}
public static void Run()
{
//Store the details of the daemon (Ae Title, IP, port)
var daemon = new Entity("PHYSX_DICOM", "10.22.86.64", 51402);
//Store the details of the client (Ae Title, port) -> IP address is determined by CreateLocal() method
var local = Entity.CreateLocal("DICOMEC1", 9999);
//Set up a client (DICOM SCU = Service Class User)
var client = new DICOMSCU(local);
//Set up a receiver to catch the files as they come in
var receiver = new DICOMSCP(local);
//Let the daemon know we can take anything it sends
receiver.SupportedAbstractSyntaxes = AbstractSyntax.ALL_RADIOTHERAPY_STORAGE;
//Set up storage location
var desktopPath = Environment.GetFolderPath(Environment.SpecialFolder.Desktop);
var storagePath = Path.Combine(desktopPath, "DICOM Storage");
Directory.CreateDirectory(storagePath);
//Set the action when a DICOM files comes in
receiver.DIMSEService.CStoreService.CStorePayloadAction = (dcm, asc) =>
{
var path = Path.Combine(storagePath, dcm.GetSelector().SOPInstanceUID.Data + ".dcm");
Console.WriteLine($"Writing file {path}...");
dcm.Write(path);
return(true); // Lets daemom know if you successfully wrote to drive
};
receiver.ListenForIncomingAssociations(true);
//Build a finder class to help with C-FIND operations
var finder = client.GetCFinder(daemon);
var studies = finder.FindStudies("DA00001");
var series = finder.FindSeries(studies);
//Filter series by modality, then create list of
var plans = series.Where(s => s.Modality == "RTPLAN")
.SelectMany(ser => finder.FindImages(ser));
var doses = series.Where(s => s.Modality == "RTDOSE")
.SelectMany(ser => finder.FindImages(ser));
var cts = series.Where(s => s.Modality == "CT")
.SelectMany(ser => finder.FindImages(ser));
var mover = client.GetCMover(daemon);
ushort msgId = 1;
foreach (var plan in plans)
{
Console.WriteLine($"Sending plan {plan.SOPInstanceUID}...");
//Make sure Mobius is on the whitelist of the daemon
var response = mover.SendCMove(plan, local.AeTitle, ref msgId);
Console.WriteLine($"DICOM C-Move Results : ");
Console.WriteLine($"Number of Completed Operations : {response.NumberOfCompletedOps}");
Console.WriteLine($"Number of Failed Operations : {response.NumberOfFailedOps}");
Console.WriteLine($"Number of Remaining Operations : {response.NumberOfRemainingOps}");
Console.WriteLine($"Number of Warning Operations : {response.NumberOfWarningOps}");
}
Console.Read(); //Stop here
}
public static void Main(string[] args)
{
List <IDpair> idPairs = new List <IDpair>();
var IDlist = new List <string>();
if (args.Length == 1)
{
IDlist = args[0].Split(';').ToList();
}
else
{
throw new Exception("Wrong number of inputs");
}
// Split in pairs
foreach (string line in IDlist)
{
idPairs.Add(new IDpair(line));
}
// Create all required entities
//var me = new Entity("EvilDICOMC", "10.0.129.139", 50401);
//var me = Entity.CreateLocal("DCMGRBC", 51167);
var me = Entity.CreateLocal("DCMGRBer", 50400);
var scu = new DICOMSCU(me);
//var scp = new DICOMSCP
Entity reciever = new Entity(AEtitle, ipadress, port);
DICOMSCP scp = new DICOMSCP(reciever);
//var scpEntity = Entity.CreateLocal("EvilDICOM", 50400);
//var scpEntity = new Entity("EvilDICOM", "10.0.129.139", 50400);
//var scp = new FileWriterSCP(scpEntity, outPath);
//var scp = new DICOMSCP(scpEntity);
//scp.SupportedAbstractSyntaxes = AbstractSyntax.ALL_RADIOTHERAPY_STORAGE;
//scp.ListenForIncomingAssociations(true);
//var logger = new ConsoleLogger(scp.Logger, ConsoleColor.Red);
var qb = new QueryBuilder(scu, daemon);
ushort msgId = 1;
// Loop over ID pairs and pull files from ARIA OIS to finalPath
foreach (IDpair idPair in idPairs)
{
try
{
//qb.SendImage(new EvilDICOM.Network.DIMSE.IOD.CFindImageIOD() { PatientId = idPair.Id, SOPInstanceUID = idPair.Uid }, "EvilDICOM", ref msgId);
CFindImageIOD iod = new CFindImageIOD()
{
PatientId = idPair.Id, SOPInstanceUID = idPair.Uid
};
scu.SendCMoveImage(daemon, iod, scp.ApplicationEntity.AeTitle, ref msgId);
}
catch (Exception e)
{
Console.WriteLine(e.Message + "\n" + idPair.Uid);
}
}
}
public SelectPlanUI(VMS.TPS.Common.Model.API.Application app, Entity daemon, DICOMSCU scu, FileWriterSCP scp, string path)
{
this.app = app;
this.daemon = daemon;
this.scu = scu;
this.scp = scp;
this.path = path;
this.Location = new Point(0, 0);
InitializeComponent();
//textBoxPatId.Text = "QC_Checklista";
}
/// <summary>
/// This tutorial is outlined in chapter 4 of Scripting in RT for Physicists (C-ECHO)
/// </summary>
public static void Run()
{
//Store the details of the daemon (Ae Title, IP, port)
var daemon = new Entity("PHYSX_DICOM", "10.22.86.64", 51402);
//Store the details of the client (Ae Title, port) -> IP address is determined by CreateLocal() method
var local = Entity.CreateLocal("DICOMEC1", 9999);
//Set up a client (DICOM SCU = Service Class User)
var client = new DICOMSCU(local);
//TRY C-ECHO
var canPing = client.Ping(daemon);
//Write results to console
Console.WriteLine($"DICOM C-Echo from {local.AeTitle} => " +
$"{daemon.AeTitle} @{daemon.IpAddress}:{daemon.Port} was successfull? {canPing}");
Console.Read(); //Stop here
}
public DICOMhandler(string id, string planUID, string doseUID, string tempPath, Entity daemon, DICOMSCU puller, FileWriterSCP catcher, double alphaBeta, double dosePerFraction, int nFractions)
{
this.id = id;
this.planUID = planUID;
this.doseUID = doseUID;
this.alphaBeta = alphaBeta;
this.dosePerFraction = dosePerFraction;
this.tempPath = tempPath;
this.nFractions = nFractions;
this.daemon = daemon;
this.puller = puller;
this.catcher = catcher;
this.qb = new QueryBuilder(puller, daemon);
}
public static void Run()
{
//Store the details of the daemon (Ae Title, IP, port)
var daemon = new Entity("PHYSX_DICOM", "10.22.86.64", 51402);
//Store the details of the mobius DICOM entity (Ae Title, IP, port)
var mobius = new Entity("MOBIUST", "10.241.20.41", 104);
//Store the details of the client (Ae Title, port) -> IP address is determined by CreateLocal() method
var local = Entity.CreateLocal("DICOMEC1", 9999);
//Set up a client (DICOM SCU = Service Class User)
var client = new DICOMSCU(local);
//Build a finder class to help with C-FIND operations
var finder = client.GetCFinder(daemon);
var studies = finder.FindStudies("DA00001");
var series = finder.FindSeries(studies);
//Filter series by modality, then create list of
var plans = series.Where(s => s.Modality == "RTPLAN")
.SelectMany(ser => finder.FindImages(ser));
var doses = series.Where(s => s.Modality == "RTDOSE")
.SelectMany(ser => finder.FindImages(ser));
var cts = series.Where(s => s.Modality == "CT")
.SelectMany(ser => finder.FindImages(ser));
var mover = client.GetCMover(daemon);
ushort msgId = 1;
foreach (var plan in plans)
{
Console.WriteLine($"Sending plan {plan.SOPInstanceUID}...");
//Make sure Mobius is on the whitelist of the daemon
var response = mover.SendCMove(plan, mobius.AeTitle, ref msgId);
Console.WriteLine($"DICOM C-Move Results : ");
Console.WriteLine($"Number of Completed Operations : {response.NumberOfCompletedOps}");
Console.WriteLine($"Number of Failed Operations : {response.NumberOfFailedOps}");
Console.WriteLine($"Number of Remaining Operations : {response.NumberOfRemainingOps}");
Console.WriteLine($"Number of Warning Operations : {response.NumberOfWarningOps}");
}
Console.Read(); //Stop here
}
static void Main(string[] args)
{
var scp = new DICOMSCP(Entity.CreateLocal("SCP", 9999));
////new ConsoleLogger(scp.Logger);
//scp.SupportedAbstractSyntaxes = AbstractSyntax.ALL_RADIOTHERAPY_STORAGE;
//int i = 1;
//scp.DIMSEService.CStoreService.CStorePayloadAction = (dcm, asc) =>
//{
// Thread.Sleep(6000);
// Assert.AreEqual(dcm.SOPClass, SOPClass.CTImageStorage);
// Assert.AreEqual(dcm.PixelStream.Length, 10000);
// Assert.AreEqual(dcm.GetSelector().PatientID.Data, "123456");
// Console.WriteLine($"Received {i++} files");
// return true;
//};
//scp.ListenForIncomingAssociations(true);
var scu = new DICOMSCU(Entity.CreateLocal("SCU", 9998));
scu.IdleTimeout = 10000;
ushort msg = 1;
foreach (var dcm in GenerateDICOMFiles())
{
var resp = scu.GetCStorer(scp.ApplicationEntity).SendCStore(dcm, ref msg);
if (resp == null)
{
Console.WriteLine("SCU Timeout!");
break;
}
else if (resp.Status == (ushort)Status.FAILURE)
{
Console.WriteLine("No connection");
break;
}
}
Console.Read();
}
public EQD2Control(User currentUser, Patient pat, PlanSetup plan, Entity daemon, DICOMSCU scu, FileWriterSCP scp, string tempPath)
{
this.tempPath = tempPath;
this.currentUser = currentUser;
this.patient = pat;
this.plan = plan;
this.daemon = daemon;
this.scu = scu;
this.scp = scp;
this.totalDose = Convert.ToDouble(plan.TotalPrescribedDose.ValueAsString);
this.dosePerFraction = plan.UniqueFractionation.PrescribedDosePerFraction.Dose;
this.nFractions = (int)plan.UniqueFractionation.NumberOfFractions;
this.planUID = plan.UID;
this.doseUID = plan.Dose.UID;
InitializeComponent();
// place info
textBoxPat.Text = patient.ToString();
textBoxPlan.Text = plan.ToString();
textBoxFractionation.Text = plan.UniqueFractionation.PrescribedDosePerFraction.ToString() + " × " + this.nFractions + " = " + plan.TotalPrescribedDose.ToString();
textBox1.Text = alphaBeta.ToString();
}
/// <summary>
/// This tutorial is outlined in chapter 4 of Scripting in RT for Physicists (C-FIND)
/// </summary>
public static void Run()
{
//Store the details of the daemon (Ae Title, IP, port)
var daemon = new Entity("PHYSX_DICOM", "10.22.86.64", 51402);
//Store the details of the client (Ae Title, port) -> IP address is determined by CreateLocal() method
var local = Entity.CreateLocal("DICOMEC1", 9999);
//Set up a client (DICOM SCU = Service Class User)
var client = new DICOMSCU(local);
//Build a finder class to help with C-FIND operations
var finder = client.GetCFinder(daemon);
var studies = finder.FindStudies("DA00001");
var series = finder.FindSeries(studies);
var images = finder.FindImages(series);
//Write results to console
Console.WriteLine($"DICOM C-Find from {local.AeTitle} => " +
$"{daemon.AeTitle} @{daemon.IpAddress}:{daemon.Port}:");
Console.WriteLine($"{studies.Count()} Studies Found");
Console.WriteLine($"{series.Count()} Series Found");
Console.WriteLine($"{images.Count()} Images Found");
Console.Read(); //Stop here
}
/// <summary>
/// A Query builder constructor which requires a SCU and SCP entity
/// </summary>
/// <param name="scu">The SCU client which will perform the operations and queries</param>
/// <param name="scp">the SCP which will send the results</param>
public QueryBuilder(DICOMSCU scu, Entity scp)
{
_scu = scu;
_scp = scp;
}
public CMover(DICOMSCU dICOMSCU, Entity callingEntity)
{
this._scu = dICOMSCU;
this.callingEntity = callingEntity;
this._scu.DIMSEService.CMoveResponseReceived += new DIMSEService.DIMSEResponseHandler <CMoveResponse>(this.DIMSEService_CMoveResponseReceived);
}
private void runButton_Click(object sender, RoutedEventArgs e)
{
// Store the details of the daemon (Ae Title , IP , port )
var daemon = new Entity(DaemonTitleTextBox.Text, DaemonIpTextBox.Text, int.Parse(DaemonPortTextBox.Text));
// Store the details of the client (Ae Title , port ) -> IP address is determined by CreateLocal() method
var local = Entity.CreateLocal(AEtitleTextBox.Text, int.Parse(AEportTextBox.Text));
// Set up a client ( DICOM SCU = Service Class User )
var client = new DICOMSCU(local);
var storer = client.GetCStorer(daemon);
ushort msgId = 1;
var canPing = client.Ping(daemon);
if (canPing)
{
echoButton.Background = System.Windows.Media.Brushes.LawnGreen;
progressBar.Value = 0;
runButton.IsEnabled = false;
if (!Directory.Exists(outputFolderPath))
{
Directory.CreateDirectory(outputFolderPath);
}
runButton.IsEnabled = false;
string dir = inputFolderPath;
var toAnonymize = Enumerable.Empty <string>();
if (subDirCheckBox.IsChecked == false)
{
toAnonymize = Directory.GetFiles(dir).Where(f => DumpSingleDicomTag(f, "0008,0060") != "fail" & !Path.GetFileName(f).Contains("_ignore"));
}
else
{
toAnonymize = Directory.GetFiles(dir, "*", SearchOption.AllDirectories).Where(f => DumpSingleDicomTag(f, "0008,0060") != "fail" & !Path.GetFileName(f).Contains("_ignore"));
}
int np = toAnonymize.Count();
ShowLogMsg("\nNew import process has started.");
ShowLogMsg("Number of DICOM files for importing: " + np.ToString() + "\n");
int count = 1;
bool importSuccess = true;
foreach (var file in toAnonymize)
{
// Reads DICOM object into memory
var dcm = EvilDICOM.Core.DICOMObject.Read(file);
var response = storer.SendCStore(dcm, ref msgId);
// Write results to console
//await Task.Run(() => ShowLogMsg($" DICOM C-Store of {Path.GetFileName(file)} from { local.AeTitle } => { daemon.AeTitle } {(EvilDICOM.Network.Enums.Status)response.Status }"));
progressBar.Value = count * 100 / np;
ProgressTextBlock.Text = "Import in progress....";
count++;
}
if (importSuccess == true)
{
ShowLogMsg("\nImport completed successfully.");
ShowLogMsg("");
ProgressTextBlock.Text = "Import completed successfully";
progressBar.Value = 100;
}
else
{
ShowLogMsg("\nImport completed with Erros.");
ShowLogMsg("");
ProgressTextBlock.Text = "Import completed with Errors";
progressBar.Value = 100;
}
runButton.IsEnabled = true;
}
else
{
echoButton.Background = System.Windows.Media.Brushes.PaleVioletRed;
ShowLogMsg("\nNo import is possible. Echo to Daemon failed.");
ProgressTextBlock.Text = "Echo failed. No Import was done.";
}
}
public QueryBuider(DICOMSCU scu, Entity scp)
{
_scu = scu;
_scp = scp;
}
static int Execute(MainSettings settings)
{
// start by sending mail
sendMail.Program.send(settings.MAILTO, "MIQA_xBot initiated", "Export to MIQA will begin now.", settings.MAIL_USER, settings.MAIL_DOMAIN, settings.SMTP_SERVER);
List <CFindImageIOD> iods = new List <CFindImageIOD>();
Entity daemon = Entity.CreateLocal(settings.DBDAEMON_AETITLE, settings.DBDAEMON_PORT);
// define the local service class
var me = Entity.CreateLocal(settings.SCU_AETITLE, settings.SCU_PORT);
var scu = new DICOMSCU(me);
// define the query builder
var qb = new QueryBuilder(scu, daemon);
ushort msgId = 1;
// read the xml file
string xml = File.ReadAllText(settings.XporterPath);
Xports xPort = xml.ParseXML <Xports>();
// define the recievr
//Entity reciever = new Entity(xPort.Xporter.AEtitle, getIP(xPort.Xporter.ipstring), xPort.Xporter.port);
Entity reciever = new Entity(xPort.Xporter.AEtitle, xPort.Xporter.getIP(), xPort.Xporter.port);
DICOMSCP scp = new DICOMSCP(reciever);
// Query plan
DataTable plans = new DataTable();
if (!String.IsNullOrEmpty(xPort.Xporter.SQLstring))
{
SqlInterface.Connect(settings);
plans = xPort.Query(settings.LAG_DAYS);
SqlInterface.Disconnect();
}
// loop through plans
foreach (DataRow row in plans.Rows)
{
var patId = (string)row["PatientId"];
var planUID = (string)row["UID"];
iods.Add(new CFindImageIOD()
{
PatientId = patId, SOPInstanceUID = planUID
});
// loop through items and query based on type
foreach (string item in xPort.Xporter.include.ToList())
{
string itemSqlString = string.Empty;
switch (item)
{
case "planDose":
itemSqlString = "select distinct UID = DoseMatrix.DoseUID from DoseMatrix where DoseMatrix.PlanSetupSer = " + (Int64)row["PlanSer"];
break;
case "fieldDoses":
itemSqlString = "select distinct UID = DoseMatrix.DoseUID from DoseMatrix, Radiation where Radiation.PlanSetupSer = " + (Int64)row["PlanSer"] + " and DoseMatrix.RadiationSer = Radiation.RadiationSer";
break;
case "slices":
itemSqlString = "select UID=Slice.SliceUID from Slice, Image, StructureSet, PlanSetup where PlanSetup.PlanSetupSer=" + (Int64)row["PlanSer"] + " and StructureSet.StructureSetSer=PlanSetup.StructureSetSer and Image.ImageSer=StructureSet.ImageSer and Slice.SeriesSer=Image.SeriesSer";
break;
case "structures":
itemSqlString = "select UID=StructureSet.StructureSetUID from PlanSetup, StructureSet where PlanSetup.PlanSetupSer=" + (Int64)row["PlanSer"] + " and StructureSet.StructureSetSer=PlanSetup.StructureSetSer";
break;
case "images":
itemSqlString = "select UID=Slice.SliceUID from Slice, ImageSlice, Radiation where Radiation.PlanSetupSer = " + (Int64)row["PlanSer"] + " and ImageSlice.ImageSer = Radiation.RefImageSer and Slice.SliceSer = ImageSlice.SliceSer";
break;
case "records":
itemSqlString = "select UID=TreatmentRecord.TreatmentRecordUID from TreatmentRecord, RTPlan where RTPlan.PlanSetupSer= " + (Int64)row["PlanSer"] + " and TreatmentRecord.RTPlanSer=RTPlan.RTPlanSer";
break;
default:
itemSqlString = String.Empty;
break;
}
if (!String.IsNullOrEmpty(itemSqlString))
{
DataTable includeItem = SqlInterface.Query(itemSqlString);
foreach (DataRow itemRow in includeItem.Rows)
{
iods.Add(new CFindImageIOD()
{
PatientId = patId, SOPInstanceUID = (string)itemRow["UID"]
});
}
}
}
}
if (xPort.Xporter.active)
{
Console.WriteLine(iods.Count.ToString());
// Remove duplicate UIDs
if (!xPort.Xporter.allowDoublets)
{
iods = ListHandler.Unique(iods);
}
Console.WriteLine(iods.Count.ToString());
foreach (var iod in iods)
{
// Send it
scu.SendCMoveImage(daemon, iod, xPort.Xporter.AEtitle, ref msgId);
// We need this to pump messages in debugging
Console.WriteLine(iod.SOPInstanceUID.ToString());
}
}
// overwrite lastActivity
if (plans.Rows.Count > 0)
{
// Get last date encountered
DateTime lastPlan = (DateTime)plans.Rows[plans.Rows.Count - 1]["MAXDate"];
xPort.Xporter.lastActivity = lastPlan.ToString("yyyy-MM-dd");
// write xml
using (FileStream fs = new FileStream(settings.XporterPath, FileMode.Create))
{
XmlSerializer _xSer = new XmlSerializer(typeof(Xports));
_xSer.Serialize(fs, xPort);
}
}
if (xPort.Xporter.active)
{
return(plans.Rows.Count);
}
else
{
return(0);
}
}
static void Execute()
{
List <CFindImageIOD> iods = new List <CFindImageIOD>();
// define the DB Deamon entity
Entity daemon = Entity.CreateLocal(AEtitleDB, portDB);
// define the local service class
var me = Entity.CreateLocal("EvilDICOMC", 50400);
var scu = new DICOMSCU(me);
// define the query builder
var qb = new QueryBuilder(scu, daemon);
ushort msgId = 1;
// xml Deserialize
string xml = File.ReadAllText(Settings.xPorterPath);
var xport = xml.ParseXML <xports>();
// Define the reciever
Entity reciever = new Entity(xport.xporter.AEtitle, xport.xporter.ipstring, xport.xporter.port);
DICOMSCP scp = new DICOMSCP(reciever);
// Query plan
DataTable plans = new DataTable();
if (!String.IsNullOrEmpty(xport.xporter.SQLstring))
{
SqlInterface.Connect();
plans = xport.Query();
SqlInterface.Disconnect();
}
// loop through plans
foreach (DataRow row in plans.Rows)
{
var patId = ((string)row["PatientId"]);
// Remove special characters from patId
byte[] patIdBytes;
patIdBytes = Encoding.GetEncoding("ISO-8859-8").GetBytes(patId);
patId = Encoding.UTF8.GetString(patIdBytes);
var ImageUID = (string)row["ImageUID"];
var RefUID = (string)row["RefUID"];
double MU = (double)row["MU"];
iods.Add(new CFindImageIOD()
{
PatientId = patId, SOPInstanceUID = ImageUID
});
iods.Add(new CFindImageIOD()
{
PatientId = patId, SOPInstanceUID = RefUID
});
if (xport.xporter.active)
{
// Generate linking text file
string[] content = { ImageUID, RefUID, MU.ToString(), Settings.DoseCrit, Settings.DistCrit, Settings.DoseThreshold, Settings.LocalDose, Settings.AcceptCrit };
File.WriteAllLines(ImageUID + ".dat", content);
// SFTP it
SFTP.Send(ImageUID + ".dat");
// Delte file
File.Delete(ImageUID + ".dat");
}
}
// change lastActivity
if (plans.Rows.Count > 0)
{
DateTime lastPlan = (DateTime)plans.Rows[plans.Rows.Count - 1]["DateTime"];
xport.xporter.lastActivity = lastPlan.ToString("yyyy-MM-dd HH:mm:ss.fff");
// write xml
using (FileStream fs = new FileStream(Settings.xPorterPath, FileMode.Create))
{
XmlSerializer _xSer = new XmlSerializer(typeof(xports));
_xSer.Serialize(fs, xport);
}
}
// if active send
if (xport.xporter.active)
{
Console.WriteLine(iods.Count.ToString());
// Remove duplicate UIDs
if (!xport.xporter.allowDoublets)
{
iods = ListHandler.Unique(iods);
}
Console.WriteLine(iods.Count.ToString());
foreach (var iod in iods)
{
// Send it
scu.SendCMoveImage(daemon, iod, xport.xporter.AEtitle, ref msgId);
// Add logging
// verify file recieved
var recieved = SFTP.Verify("RI." + iod.SOPInstanceUID + ".dcm");
if (!recieved)
{
throw new FileNotFoundException("CMove Operation not verified.");
}
}
}
}
/// <summary>
/// A Query builder constructor which requires a SCU and SCP entity
/// </summary>
/// <param name="scu">The SCU client which will perform the operations and queries</param>
/// <param name="scp">the SCP which will send the results</param>
public CFinder(DICOMSCU scu, Entity scp)
{
_scu = scu;
_scp = scp;
}
public StorageVerifier(DICOMSCU dICOMSCU, Entity callingEntity)
{
this._scu = dICOMSCU;
this.callingEntity = callingEntity;
}
static void Execute(vapi.Application app, Entity daemon, DICOMSCU scu, FileWriterSCP scp, string path)
{
SelectPlanUI selectPlanUI = new SelectPlanUI(app, daemon, scu, scp, path);
selectPlanUI.ShowDialog();
}
public CStorer(DICOMSCU dICOMSCU, Entity callingEntity)
{
this._scu = dICOMSCU;
this.callingEntity = callingEntity;
}
protected override void OnStartup(StartupEventArgs e)
{
// Store the details of the daemon (Ae Title , IP , port )
var daemon = new Entity("VMSDBD1", "192.168.1.11", 5678);
// Store the details of the client (Ae Title , port ) -> IP address is determined by CreateLocal() method
var local = Entity.CreateLocal("DICOMEC1", 5681);
// Set up a client ( DICOM SCU = Service Class User )
var client = new DICOMSCU(local);
// Set up a receiver to catch the files as they come in
var receiver = new DICOMSCP(local);
// Let the daemon know we can take anything it sends
receiver.SupportedAbstractSyntaxes = AbstractSyntax.ALL_RADIOTHERAPY_STORAGE;
// Set up storage location
var desktopPath = Environment.GetFolderPath(Environment.SpecialFolder.Desktop);
var storagePath = Path.Combine(desktopPath, "DICOM Storage");
Directory.CreateDirectory(storagePath);
// Set the action when a DICOM files comes in
receiver.DIMSEService.CStoreService.CStorePayloadAction = (dcm, asc) =>
{
var path = Path.Combine(storagePath, dcm.GetSelector().
SOPInstanceUID.Data + ".dcm");
Console.WriteLine($"Writing file { path }... ");
dcm.Write(path);
return(true);
};
receiver.ListenForIncomingAssociations(true);
// Build a finder class to help with C- FIND operations
var finder = client.GetCFinder(daemon);
var studies = finder.FindStudies("US-EC-020");
var series = finder.FindSeries(studies);
// Filter series by modality , then create list of
//we're not finding any studies - why?
var plans = series.Where(s => s.Modality == "RTPLAN").SelectMany(ser => finder.FindImages(ser));
var doses = series.Where(s => s.Modality == "RTDOSE").SelectMany(ser => finder.FindImages(ser));
var cts = series.Where(s => s.Modality == "CT").SelectMany(ser => finder.FindImages(ser));
var mover = client.GetCMover(daemon);
ushort msgId = 1;
foreach (var plan in plans)
{
Console.WriteLine($"Sending plan { plan.SOPInstanceUID }... ");
// Make sure Mobius is on the whitelist of the daemon
var response = mover.SendCMove(plan, local.AeTitle, ref msgId);
Console.WriteLine($"DICOM CMove Results: ");
Console.WriteLine($"Number of Completed Operations: { response.NumberOfCompletedOps }");
Console.WriteLine($"Number of Failed Operations: { response.NumberOfFailedOps }");
Console.WriteLine($"Number of Remaining Operations: { response.NumberOfRemainingOps}");
Console.WriteLine($"Number of Warning Operations: { response.NumberOfWarningOps}");
}
Console.Read();
// Stop here
//var myEntity = new Entity("VMSDBD1","192.168.1.11",5678);
//var scp = new DICOMSCP(myEntity);
//scp.ListenForIncomingAssociations(keepListenerRunning: true);
//var en1 = Entity.CreateLocal("EvilDICOM", "666");
//var scu = new DICOMSCU(en1);
////USING EVILDICOM
////var localEntity = new Entity("DCMTK")
//var daemon = new Entity("VarianDaemon", "192.168.1.11", 5678);
////var client = new DICOMSCP();
//var client = new DICOMSCU(Entity.CreateLocal("MyEntity", 9999));
//var finder = client.GetCFinder(daemon);
//var studies = finder.FindStudies("PATIENTID");
//var series = finder.FindSeries(studies);
////var series = finder.FindSeries(studies).Where(s=>s.Modality=="REG");
//var mover = client.GetCMover(daemon);
//mover.SendCMove(series.First(),daemon.AeTitle)
//var records = finder.FindRTRecords(series);
//ecords.First().TreatmentDate
//UNCOMMENT FOR OUR EXAMPLE PLANCHECKER
//string[] args = e.Args;
//base.OnStartup(e);
//var bs = new AppBootstrapper<MainView>(() => { return VMS.TPS.Common.Model.API.Application.CreateApplication(); });
////You can use the following to load a context (for debugging purposes)
////args = ContextIO.ReadArgsFromFile(@"C: \Users\cwalker\Desktop\context.txt");
////Might disable (uncomment) for plugin mode
//bs.IsPatientSelectionEnabled = false;
//bs.Run(args);
}