public VcvItem(string accession, string version, long updatedDateTicks, ClinVarCommon.ReviewStatus reviewStatus, IEnumerable <string> significances)
{
Accession = accession;
Version = version;
LastUpdatedDate = new DateTime(updatedDateTicks);
ReviewStatus = reviewStatus;
Significances = significances;
VariantId = int.Parse(accession.Substring(3));
}
public VcvSaItem(IChromosome chromosome, int position, string refAllele, string altAllele, string accession, string version, DateTime lastUpdatedDate, ClinVarCommon.ReviewStatus reviewStatus, IEnumerable <string> significances)
{
Chromosome = chromosome;
Position = position;
RefAllele = refAllele;
AltAllele = altAllele;
_accession = accession;
_version = version;
_lastUpdatedDate = lastUpdatedDate;
_reviewStatus = reviewStatus;
_significances = significances;
}
public ClinVarItem(IChromosome chromosome,
int position,
int stop,
string refAllele,
string altAllele,
SaJsonSchema jsonSchema,
IEnumerable <string> alleleOrigins,
string variantType,
string id,
string variationId,
ClinVarCommon.ReviewStatus reviewStatus,
IEnumerable <string> medGenIds,
IEnumerable <string> omimIds,
IEnumerable <string> orphanetIds,
IEnumerable <string> phenotypes,
string[] significances,
IEnumerable <long> pubmedIds = null,
long lastUpdatedDate = long.MinValue
)
{
Chromosome = chromosome;
Position = position;
Stop = stop;
AlleleOrigins = alleleOrigins;
AltAllele = altAllele;
JsonSchema = jsonSchema;
VariantType = variantType;
Id = id;
VariationId = variationId;
MedGenIds = medGenIds;
OmimIds = omimIds;
OrphanetIds = orphanetIds;
Phenotypes = phenotypes;
RefAllele = refAllele;
Significances = significances;
PubmedIds = pubmedIds;
LastUpdatedDate = lastUpdatedDate;
IsAlleleSpecific = null;
ReviewStatus = reviewStatus;
}
