private void Retry(ChromatogramLoadingStatus status)
{
ChromatogramManager.RemoveFile(status.FilePath);
if (!_partialProgressList.Contains(status.FilePath))
{
_partialProgressList.Add(status.FilePath);
}
graphChromatograms.ClearGraph(status.FilePath);
for (int i = 0; i < flowFileStatus.Controls.Count; i++)
{
var control = (FileProgressControl)flowFileStatus.Controls[i];
if (control.FilePath.Equals(status.FilePath))
{
control.Reset();
Selected = i;
break;
}
}
// Add this file back into the chromatogram set for each of its replicates.
ModifyDocument(Resources.AllChromatogramsGraph_Retry_Retry_import_results, monitor =>
{
Program.MainWindow.ModifyDocumentNoUndo(doc =>
{
var oldResults = doc.Settings.MeasuredResults ??
new MeasuredResults(new ChromatogramSet[0]);
var newResults = oldResults.AddDataFile(status.FilePath, status.ReplicateNames);
return(doc.ChangeMeasuredResults(newResults, monitor));
});
});
}
public ResultsMemoryDocumentContainer(SrmDocument docInitial, string pathInitial, bool wait)
{
SetDocument(docInitial, null, wait);
// Chromatogram loader needs file path to know how to place the .skyd file
DocumentFilePath = pathInitial;
ChromatogramManager = new ChromatogramManager(false);
ChromatogramManager.Register(this);
Register(ChromatogramManager);
LibraryManager = new LibraryManager();
LibraryManager.Register(this);
Register(LibraryManager);
RetentionTimeManager = new RetentionTimeManager();
RetentionTimeManager.Register(this);
Register(RetentionTimeManager);
IonMobilityManager = new IonMobilityLibraryManager();
IonMobilityManager.Register(this);
Register(IonMobilityManager);
IrtDbManager = new IrtDbManager();
IrtDbManager.Register(this);
Register(IrtDbManager);
}
public override void ResetProgress()
{
base.ResetProgress();
ChromatogramManager.ResetProgress(Document);
LibraryManager.ResetProgress(Document);
RetentionTimeManager.ResetProgress(Document);
IonMobilityManager.ResetProgress(Document);
IrtDbManager.ResetProgress(Document);
}
public virtual void Dispose()
{
ChromatogramManager.Dispose();
// Release current document to ensure the streams are closed on it
SetDocument(new SrmDocument(SrmSettingsList.GetDefault()), Document);
foreach (var loader in BackgroundLoaders)
{
loader.ClearCache();
}
}
private void ElapsedTimer_Tick(object sender, EventArgs e)
{
// Update timer and overall progress bar.
// ReSharper disable LocalizableElement
lblDuration.Text = _stopwatch.Elapsed.ToString(@"hh\:mm\:ss");
// ReSharper restore LocalizableElement
// Determine if we should automatically retry any failed file.
if (_retryTime <= DateTime.Now)
{
_retryTime = DateTime.MaxValue;
_retryDlg = new ImportResultsRetryCountdownDlg(RETRY_COUNTDOWN,
() =>
{
for (int i = 0; i < flowFileStatus.Controls.Count; i++)
{
var control = (FileProgressControl)flowFileStatus.Controls[_nextRetry];
if (++_nextRetry == flowFileStatus.Controls.Count)
{
_nextRetry = 0;
}
if (control.Error != null)
{
ChromatogramManager.RemoveFile(control.FilePath);
Retry(control.Status);
break;
}
}
_retryDlg.Dispose();
},
() =>
{
_stopwatch.Stop();
elapsedTimer.Stop();
_retryDlg.Dispose();
});
_retryDlg.ShowDialog(this);
}
}
public MultiFileLoadMonitor(ChromatogramManager manager, IDocumentContainer container, object tag)
: base(manager, container, tag)
{
_chromatogramManager = manager;
}
