Esempio n. 1
0
        /// <summary>
        /// Combine isotope pattern
        /// </summary>
        /// <param name="argNumberPermethlationSite"></param>
        /// <param name="argStartPurity"></param>
        /// <param name="argIntensities"></param>
        /// <returns></returns>
        public static float Estimater3(COL.GlycoLib.GlycanCompound argCompond, int argTheoreticalMonoIdx, float[] argIntensities)
        {
            double[] isotopeRatio = new double[argIntensities.Length];
            for (int i = 0; i < isotopeRatio.Length; i++)
            {
                isotopeRatio[i] = 0;
            }
            ChemicalFormula MonoChemFormula = new ChemicalFormula();

            MonoChemFormula.Add("C", argCompond.Carbon);
            MonoChemFormula.Add("H", argCompond.Hydrogen);
            MonoChemFormula.Add("O", argCompond.Oxygen);
            if (argCompond.Carbon13 != 0)
            {
                MonoChemFormula.Add("C{13}", argCompond.Carbon13);
            }
            if (argCompond.Deuterium != 0)
            {
                MonoChemFormula.Add("D", argCompond.Deuterium);
            }
            if (argCompond.Sodium != 0)
            {
                MonoChemFormula.Add("Na", argCompond.Sodium);
            }
            if (argCompond.Nitrogen != 0)
            {
                MonoChemFormula.Add("N", argCompond.Nitrogen);
            }
            double[] IsotopeDist = MonoChemFormula.GetIsotopicDistribution(10);


            return(0.0f);
        }
Esempio n. 2
0
        /// <summary>
        /// Combine isotope pattern
        /// </summary>
        /// <param name="argNumberPermethlationSite"></param>
        /// <param name="argStartPurity"></param>
        /// <param name="argIntensities"></param>
        /// <returns></returns>
        public static float Estimater3(COL.GlycoLib.GlycanCompound argCompond,int argTheoreticalMonoIdx, float[] argIntensities)
        {
            double[] isotopeRatio = new double[argIntensities.Length];
            for (int i = 0; i < isotopeRatio.Length; i++)
            {
                isotopeRatio[i] = 0;
            }
            ChemicalFormula MonoChemFormula = new ChemicalFormula();
            MonoChemFormula.Add("C", argCompond.Carbon);
            MonoChemFormula.Add("H", argCompond.Hydrogen);
            MonoChemFormula.Add("O", argCompond.Oxygen);
            if (argCompond.Carbon13 != 0)
            {
                MonoChemFormula.Add("C{13}", argCompond.Carbon13);
            }
            if (argCompond.Deuterium != 0)
            {
                MonoChemFormula.Add("D", argCompond.Deuterium);
            }
            if (argCompond.Sodium != 0)
            {
                MonoChemFormula.Add("Na", argCompond.Sodium);
            }
            if (argCompond.Nitrogen != 0)
            {
                MonoChemFormula.Add("N", argCompond.Nitrogen);
            }
            double[] IsotopeDist = MonoChemFormula.GetIsotopicDistribution(10);

            return 0.0f;
        }