public void F_Observation_BodySite()
{
GlobalSettings.IgnoreCardinalityErrors = true;
CodeableConcept bodySiteCode = new CodeableConcept("bsSys", "bsCode", "bsDisplay");
Bundle b;
{
BreastRadiologyDocument doc = MakeDoc();
BreastRadReport report = doc.Index.Report.Set(new BreastRadReport(doc));
SectionFindingsLeftBreast findLeft = doc.Index.FindingsLeftBreast.Set(new SectionFindingsLeftBreast(doc));
MGFinding mgFinding = findLeft.MGFinding.Set(new MGFinding(doc));
AbnormalityCyst abCyst = mgFinding.AbnormalityCyst.Append(new AbnormalityCyst(doc));
var bodySite = abCyst.BodySite.Set(new CodeableConcept("bsSystem", "bsCode"));
b = doc.Write();
}
{
BreastRadiologyDocument doc = BreastRadiologyDocument.Read(b);
BreastRadReport report = doc.Index.Report.Get();
Assert.IsTrue(report != null);
SectionFindingsLeftBreast findLeft = doc.Index.FindingsLeftBreast.Get();
Assert.IsTrue(findLeft != null);
MGFinding mgFinding = findLeft.MGFinding.Get();
Assert.IsTrue(mgFinding != null);
AbnormalityCyst[] abCyst = mgFinding.AbnormalityCyst.All().ToArray();
Assert.IsTrue(abCyst.Length == 1);
CodeableConcept bodySite = abCyst[0].BodySite.Get();
Assert.IsTrue(bodySite.Coding.Count == 1);
Assert.IsTrue(bodySite.Coding[0].System == "bsSystem");
Assert.IsTrue(bodySite.Coding[0].Code == "bsCode");
}
}
public void A_CreateBreastRadiologyDocument()
{
Bundle b;
{
BreastRadiologyDocument doc = MakeDoc();
Assert.IsTrue(doc.Index != null);
{
BreastRadReport report = doc.Index.Report.Set(new BreastRadReport(doc));
Assert.IsTrue(report.Resource.Meta.Profile.Count() == 1);
Assert.IsTrue(report.Resource.Meta.Profile.First() == "http://hl7.org/fhir/us/breast-radiology/StructureDefinition/BreastRadReport");
Assert.IsTrue(report.Resource.Code.Coding[0].System == "http://loinc.org");
Assert.IsTrue(report.Resource.Code.Coding[0].Code == "10193-1");
}
b = doc.Write();
}
{
BreastRadiologyDocument doc = BreastRadiologyDocument.Read(b);
Assert.IsTrue(doc.Index != null);
{
BreastRadReport report = doc.Index.Report.Set(new BreastRadReport(doc));
Assert.IsTrue(report != null);
Assert.IsTrue(report.Resource.Meta.Profile.Count() == 1);
Assert.IsTrue(report.Resource.Meta.Profile.First() == "http://hl7.org/fhir/us/breast-radiology/StructureDefinition/BreastRadReport");
Assert.IsTrue(report.Resource.Code.Coding[0].System == "http://loinc.org");
Assert.IsTrue(report.Resource.Code.Coding[0].Code == "10193-1");
}
}
}
public void D_Observation_HasMemberTest()
{
GlobalSettings.IgnoreCardinalityErrors = true;
Bundle b;
{
BreastRadiologyDocument doc = MakeDoc();
{
BreastRadReport report = doc.Index.Report.Set(new BreastRadReport(doc));
SectionFindingsLeftBreast findLeft = doc.Index.FindingsLeftBreast.Set(new SectionFindingsLeftBreast(doc));
MGFinding mgFinding = findLeft.MGFinding.Set(new MGFinding(doc));
MGAbnormalityAsymmetry asymmetry = mgFinding.MGAbnormalityAsymmetry.Append(new MGAbnormalityAsymmetry(doc));
asymmetry = mgFinding.MGAbnormalityAsymmetry.Append(new MGAbnormalityAsymmetry(doc));
asymmetry = mgFinding.MGAbnormalityAsymmetry.Append(new MGAbnormalityAsymmetry(doc));
}
b = doc.Write();
}
{
BreastRadiologyDocument doc = BreastRadiologyDocument.Read(b);
BreastRadReport report = doc.Index.Report.Get();
Assert.IsTrue(report != null);
SectionFindingsLeftBreast findLeft = doc.Index.FindingsLeftBreast.Get();
Assert.IsTrue(findLeft != null);
MGFinding mgFinding = findLeft.MGFinding.Get();
Assert.IsTrue(mgFinding != null);
MGAbnormalityAsymmetry[] asymmetry = mgFinding.MGAbnormalityAsymmetry.All().ToArray();
Assert.IsTrue(asymmetry.Length == 3);
}
}
public void C_Observation_ComponentTest()
{
GlobalSettings.IgnoreCardinalityErrors = true;
Bundle b;
{
BreastRadiologyDocument doc = MakeDoc();
{
BreastRadReport report = doc.Index.Report.Set(new BreastRadReport(doc));
SectionFindingsLeftBreast findLeft = doc.Index.FindingsLeftBreast.Set(new SectionFindingsLeftBreast(doc));
MGFinding mgFinding = findLeft.MGFinding.Set(new MGFinding(doc));
MGAbnormalityAsymmetry asymmetry = mgFinding.MGAbnormalityAsymmetry.Append(new MGAbnormalityAsymmetry(doc));
asymmetry.ObsChanges.Append(ObservedChangesVS.Code_DecreaseInCalcifications);
asymmetry.ObsChanges.Append(ObservedChangesVS.Code_DecreaseInSize);
}
b = doc.Write();
}
{
BreastRadiologyDocument doc = BreastRadiologyDocument.Read(b);
BreastRadReport report = doc.Index.Report.Get();
Assert.IsTrue(report != null);
SectionFindingsLeftBreast findLeft = doc.Index.FindingsLeftBreast.Get();
Assert.IsTrue(findLeft != null);
MGFinding mgFinding = findLeft.MGFinding.Get();
Assert.IsTrue(mgFinding != null);
MGAbnormalityAsymmetry[] asymmetry = mgFinding.MGAbnormalityAsymmetry.All().ToArray();
Assert.IsTrue(asymmetry.Length == 1);
Assert.IsTrue(asymmetry[0].ObsChanges.Count == 2);
Assert.IsTrue(BLMisc.SameConcept(asymmetry[0].ObsChanges.GetAt(0), ObservedChangesVS.Code_DecreaseInCalcifications));
Assert.IsTrue(BLMisc.SameConcept(asymmetry[0].ObsChanges.GetAt(1), ObservedChangesVS.Code_DecreaseInSize));
}
}
void SimpleNarrative()
{
const String prefix = "SimpleNarrativeOnlyReport";
this.DeleteExamples(prefix);
Bundle b;
{
BreastRadiologyDocument doc = this.MakeDoc();
{
BreastRadComposition index = doc.Index;
index.Resource.DateElement = doc.Date;
index.Resource.Status = CompositionStatus.Final;
index.Resource.Title = "Simple Narrative Only Breast Radiology Report";
DiagnosticReport diagnosticReport = new DiagnosticReport
{
Id = "Report"
};
BreastRadReport report = index.Report.Set(new BreastRadReport(doc, diagnosticReport));
DiagnosticReport r = report.Resource;
r.Status = DiagnosticReport.DiagnosticReportStatus.Final;
r.Category.Add(new CodeableConcept("http://terminology.hl7.org/CodeSystem/observation-category",
"imaging"));
r.Code = new CodeableConcept("http://loinc.org", "10193-1");
r.Conclusion = "Report Narrative conclusion.";
report.SetConclusionCode(BiRadsAssessmentCategoriesVS.Code_Category2);
}
b = doc.Write();
String path = this.ExamplePath(prefix, b);
b.SaveJson(path);
this.SplitExampleBundle(b, prefix);
}
}
void Complex()
{
const String prefix = "ComplexReport";
this.DeleteExamples(prefix);
Bundle b;
{
BreastRadiologyDocument doc = this.MakeDoc();
BreastRadComposition index = doc.Index;
{
index.Resource.DateElement = doc.Date;
index.Resource.Status = CompositionStatus.Final;
index.Resource.Title = "Complex Breast Radiology Report";
DiagnosticReport diagnosticReport = new DiagnosticReport
{
Id = "Report"
};
BreastRadReport report = index.Report.Set(new BreastRadReport(doc, diagnosticReport));
DiagnosticReport r = report.Resource;
r.Status = DiagnosticReport.DiagnosticReportStatus.Final;
r.Category.Add(new CodeableConcept("http://terminology.hl7.org/CodeSystem/observation-category",
"imaging"));
r.Code = new CodeableConcept("http://loinc.org", "10193-1");
r.Conclusion = "Report Narrative conclusion.";
report.SetConclusionCode(BiRadsAssessmentCategoriesVS.Code_Category2);
}
MFindingsLeftBreast findingLeft = index.FindingsLeftBreast;
SectionFindingsLeftBreast flb = findingLeft.Set(new SectionFindingsLeftBreast());
flb.Resource.Value = BiRadsAssessmentCategoriesCS.Code_Category2;
MGFinding mgFinding = flb.MGFinding.Set(new MGFinding());
mgFinding.AbnormalityCyst.Append(MakeCyst());
b = doc.Write();
String path = this.ExamplePath(prefix, b);
b.SaveJson(path);
this.SplitExampleBundle(b, prefix);
}
}
public void B_Composition_Sections()
{
GlobalSettings.IgnoreCardinalityErrors = true;
Bundle b;
{
BreastRadiologyDocument doc = MakeDoc();
{
BreastRadReport report = doc.Index.Report.Set(new BreastRadReport(doc));
Assert.IsTrue(doc.Index.FindingsLeftBreast.Get() == null);
Assert.IsTrue(doc.Index.FindingsRightBreast.Get() == null);
{
SectionFindingsLeftBreast findLeft = doc.Index.FindingsLeftBreast.Set(new SectionFindingsLeftBreast(doc));
Assert.IsTrue(doc.Index.FindingsLeftBreast.Get() != null);
Assert.IsTrue(doc.Index.FindingsLeftBreast.Get().Resource.Code.Coding[0].System == "http://hl7.org/fhir/us/breast-radiology/CodeSystem/ObservationCodes");
Assert.IsTrue(doc.Index.FindingsLeftBreast.Get().Resource.Code.Coding[0].Code == "findingsLeftBreastObservation");
}
{
SectionFindingsRightBreast findRight = doc.Index.FindingsRightBreast.Set(new SectionFindingsRightBreast(doc));
Assert.IsTrue(doc.Index.FindingsRightBreast.Get() != null);
Assert.IsTrue(doc.Index.FindingsRightBreast.Get().Resource.Code.Coding[0].System == "http://hl7.org/fhir/us/breast-radiology/CodeSystem/ObservationCodes");
Assert.IsTrue(doc.Index.FindingsRightBreast.Get().Resource.Code.Coding[0].Code == "findingsRightBreastObservation");
}
{
ServiceRecommendation rec = doc.Index.Recommendations.Append(new ServiceRecommendation(doc));
Assert.IsTrue(rec.Resource.Meta.Profile.Count() == 1);
Assert.IsTrue(rec.Resource.Meta.Profile.First() == "http://hl7.org/fhir/us/breast-radiology/StructureDefinition/ServiceRecommendation");
rec.SetCode(RecommendationsVS.Code_3DSpotCC);
Assert.IsTrue(rec.Resource.Code.Coding[0].System == RecommendationsVS.Code_3DSpotCC.Value.System);
Assert.IsTrue(rec.Resource.Code.Coding[0].Code == RecommendationsVS.Code_3DSpotCC.Value.Code);
}
{
ServiceRecommendation rec = doc.Index.Recommendations.Append(new ServiceRecommendation(doc));
Assert.IsTrue(rec.Resource.Meta.Profile.Count() == 1);
Assert.IsTrue(rec.Resource.Meta.Profile.First() == "http://hl7.org/fhir/us/breast-radiology/StructureDefinition/ServiceRecommendation");
rec.SetCode(RecommendationsVS.Code_3DSpotLM);
Assert.IsTrue(rec.Resource.Code.Coding[0].System == RecommendationsVS.Code_3DSpotLM.Value.System);
Assert.IsTrue(rec.Resource.Code.Coding[0].Code == RecommendationsVS.Code_3DSpotLM.Value.Code);
}
}
b = doc.Write();
}
{
BreastRadiologyDocument doc = BreastRadiologyDocument.Read(b);
BreastRadReport report = doc.Index.Report.Get();
Assert.IsTrue(report != null);
{
SectionFindingsLeftBreast findLeft = doc.Index.FindingsLeftBreast.Get();
Assert.IsTrue(doc.Index.FindingsLeftBreast.Get() != null);
Assert.IsTrue(doc.Index.FindingsLeftBreast.Get().Resource.Code.Coding[0].System == "http://hl7.org/fhir/us/breast-radiology/CodeSystem/ObservationCodes");
Assert.IsTrue(doc.Index.FindingsLeftBreast.Get().Resource.Code.Coding[0].Code == "findingsLeftBreastObservation");
}
{
SectionFindingsRightBreast findRight = doc.Index.FindingsRightBreast.Get();
Assert.IsTrue(doc.Index.FindingsRightBreast.Get() != null);
Assert.IsTrue(doc.Index.FindingsRightBreast.Get().Resource.Code.Coding[0].System == "http://hl7.org/fhir/us/breast-radiology/CodeSystem/ObservationCodes");
Assert.IsTrue(doc.Index.FindingsRightBreast.Get().Resource.Code.Coding[0].Code == "findingsRightBreastObservation");
}
Assert.IsTrue(doc.Index.Recommendations.Count == 2);
{
ServiceRecommendation rec = doc.Index.Recommendations.GetAt(0) as ServiceRecommendation;
Assert.IsTrue(rec != null);
Assert.IsTrue(rec.Resource.Meta.Profile.Count() == 1);
Assert.IsTrue(rec.Resource.Meta.Profile.First() == "http://hl7.org/fhir/us/breast-radiology/StructureDefinition/ServiceRecommendation");
Assert.IsTrue(rec.Resource.Code.Coding[0].System == RecommendationsVS.Code_3DSpotCC.Value.System);
Assert.IsTrue(rec.Resource.Code.Coding[0].Code == RecommendationsVS.Code_3DSpotCC.Value.Code);
}
{
ServiceRecommendation rec = doc.Index.Recommendations.GetAt(1) as ServiceRecommendation;
Assert.IsTrue(rec != null);
Assert.IsTrue(rec.Resource.Meta.Profile.Count() == 1);
Assert.IsTrue(rec.Resource.Meta.Profile.First() == "http://hl7.org/fhir/us/breast-radiology/StructureDefinition/ServiceRecommendation");
Assert.IsTrue(rec.Resource.Code.Coding[0].System == RecommendationsVS.Code_3DSpotLM.Value.System);
Assert.IsTrue(rec.Resource.Code.Coding[0].Code == RecommendationsVS.Code_3DSpotLM.Value.Code);
}
}
}