public void MixedMatrixSubtraction()
{
SquareMatrix MS = M - S;
SquareMatrix SM = S - M;
}
public void SquareMatrixInvalidDimensionTest()
{
SquareMatrix M = new SquareMatrix(0);
}
public void MixedMatrixAddition()
{
SquareMatrix MS = M + S;
SquareMatrix SM = S + M;
}
public void PC()
{
Random rng = new Random(1);
double s = 1.0 / Math.Sqrt(2.0);
MultivariateSample MS = new MultivariateSample(2);
RectangularMatrix R = new RectangularMatrix(1000, 2);
for (int i = 0; i < 1000; i++)
{
double r1 = 2.0 * rng.NextDouble() - 1.0;
double r2 = 2.0 * rng.NextDouble() - 1.0;
double x = r1 * 4.0 * s - r2 * 9.0 * s;
double y = r1 * 4.0 * s + r2 * 9.0 * s;
R[i, 0] = x; R[i, 1] = y;
MS.Add(x, y);
}
Console.WriteLine("x {0} {1}", MS.Column(0).Mean, MS.Column(0).Variance);
Console.WriteLine("y {0} {1}", MS.Column(1).Mean, MS.Column(1).Variance);
Console.WriteLine("SVD");
SingularValueDecomposition SVD = R.SingularValueDecomposition();
for (int i = 0; i < SVD.Dimension; i++)
{
Console.WriteLine("{0} {1}", i, SVD.SingularValue(i));
ColumnVector v = SVD.RightSingularVector(i);
Console.WriteLine(" {0} {1}", v[0], v[1]);
}
Console.WriteLine("PCA");
PrincipalComponentAnalysis PCA = MS.PrincipalComponentAnalysis();
Console.WriteLine("Dimension = {0} Count = {1}", PCA.Dimension, PCA.Count);
for (int i = 0; i < PCA.Dimension; i++)
{
PrincipalComponent PC = PCA.Component(i);
Console.WriteLine(" {0} {1} {2} {3}", PC.Index, PC.Weight, PC.VarianceFraction, PC.CumulativeVarianceFraction);
RowVector v = PC.NormalizedVector();
Console.WriteLine(" {0} {1}", v[0], v[1]);
}
// reconstruct
SquareMatrix U = SVD.LeftTransformMatrix();
SquareMatrix V = SVD.RightTransformMatrix();
double x1 = U[0, 0] * SVD.SingularValue(0) * V[0, 0] + U[0, 1] * SVD.SingularValue(1) * V[0, 1];
Console.WriteLine("x1 = {0} {1}", x1, R[0, 0]);
double y1 = U[0, 0] * SVD.SingularValue(0) * V[1, 0] + U[0, 1] * SVD.SingularValue(1) * V[1, 1];
Console.WriteLine("y1 = {0} {1}", y1, R[0, 1]);
double x100 = U[100, 0] * SVD.SingularValue(0) * V[0, 0] + U[100, 1] * SVD.SingularValue(1) * V[0, 1];
Console.WriteLine("x100 = {0} {1}", x100, R[100, 0]);
double y100 = U[100, 0] * SVD.SingularValue(0) * V[1, 0] + U[100, 1] * SVD.SingularValue(1) * V[1, 1];
Console.WriteLine("y100 = {0} {1}", y100, R[100, 1]);
ColumnVector d1 = U[0, 0] * SVD.SingularValue(0) * SVD.RightSingularVector(0) +
U[0, 1] * SVD.SingularValue(1) * SVD.RightSingularVector(1);
Console.WriteLine("d1 = ({0} {1})", d1[0], d1[1]);
ColumnVector d100 = U[100, 0] * SVD.SingularValue(0) * SVD.RightSingularVector(0) +
U[100, 1] * SVD.SingularValue(1) * SVD.RightSingularVector(1);
Console.WriteLine("d100 = ({0} {1})", d100[0], d100[1]);
Console.WriteLine("compare");
MultivariateSample RS = PCA.TransformedSample();
IEnumerator <double[]> RSE = RS.GetEnumerator();
RSE.MoveNext();
double[] dv1 = RSE.Current;
Console.WriteLine("{0} {1}", dv1[0], dv1[1]);
Console.WriteLine("{0} {1}", U[0, 0], U[0, 1]);
RSE.Dispose();
}