/// <summary>
/// Create a RawDataProcessor object with input folder
/// </summary>
/// <param name="filenamePath"> Location of .RAW file to process </param>
/// <param name="methodFileNamePath"> Location of method.txt </param>
public RawDataProcessor(string filenamePath, string methodFileNamePath)
{
try
{
//read in the file path name, and the method file
RawFilePathName = filenamePath;
MethodFile = new MethodFile(methodFileNamePath);
}
catch (Exception ex)
{
Console.Write(ex);
}
}
/// <summary>
/// Process a list of files in a specified folder using a specified method
/// </summary>
/// <param name="fileNames"></param>
/// <param name="methodFile"></param>
/// <param name="exportFileName"></param>
public void ProcessRawFile(string fileName, MethodFile methodFile, string exportFileName)
{
List <RawDataObject> rawDataObjects = new List <RawDataObject>();
for (int j = 0; j < methodFile.Masses.Length; j++)
{
rawDataObjects.Add(new RawDataObject(fileName, methodFile.Masses[j], methodFile.MassTolerances[j], methodFile.MassToleranceUnits[j]));
}
try
{
//write to json object to export
string rtnJsonObject = JsonConvert.SerializeObject(rawDataObjects);
//write json object to the file
System.IO.File.WriteAllText(fileName + exportFileName, rtnJsonObject);
}
catch (Exception ex)
{
Console.Write(ex);
}
}
