internal static System.String determineAtomSetCollectionReader(System.IO.StreamReader bufferedReader)
{
System.String[] lines = new System.String[4];
LimitedLineReader llr = new LimitedLineReader(bufferedReader, 16384);
for (int i = 0; i < lines.Length; ++i)
{
lines[i] = llr.readLineWithNewline();
}
if (lines[3].Length >= 6)
{
System.String line4trimmed = lines[3].Trim();
if (line4trimmed.EndsWith("V2000") || line4trimmed.EndsWith("v2000") || line4trimmed.EndsWith("V3000"))
{
return("Mol");
}
try
{
System.Int32.Parse(lines[3].Substring(0, (3) - (0)).Trim());
System.Int32.Parse(lines[3].Substring(3, (6) - (3)).Trim());
return("Mol");
}
catch (System.FormatException nfe)
{
}
}
try
{
/*int atomCount = */
System.Int32.Parse(lines[0].Trim());
return("Xyz");
}
catch (System.FormatException e)
{
}
try
{
SupportClass.Tokenizer tokens = new SupportClass.Tokenizer(lines[0].Trim(), " \t");
if ((tokens != null) && (tokens.Count >= 2))
{
System.Int32.Parse(tokens.NextToken().Trim());
return("FoldingXyz");
}
}
catch (System.FormatException e)
{
//
}
// run these loops forward ... easier for people to understand
for (int i = 0; i < startsWithRecords.Length; ++i)
{
System.String[] recordTags = startsWithRecords[i];
for (int j = 0; j < recordTags.Length; ++j)
{
System.String recordTag = recordTags[j];
for (int k = 0; k < lines.Length; ++k)
{
if (lines[k].StartsWith(recordTag))
{
return(startsWithFormats[i]);
}
}
}
}
for (int i = 0; i < containsRecords.Length; ++i)
{
System.String[] recordTags = containsRecords[i];
for (int j = 0; j < recordTags.Length; ++j)
{
System.String recordTag = recordTags[j];
for (int k = 0; k < lines.Length; ++k)
{
if (lines[k].IndexOf(recordTag) != -1)
{
return(containsFormats[i]);
}
}
}
}
if (lines[1] == null || lines[1].Trim().Length == 0)
{
return("Jme"); // this is really quite broken :-)
}
return(null);
}
internal static System.String determineAtomSetCollectionReader(System.IO.StreamReader bufferedReader, JmolAdapter.Logger logger)
{
System.String[] lines = new System.String[4];
LimitedLineReader llr = new LimitedLineReader(bufferedReader, 16384);
for (int i = 0; i < lines.Length; ++i)
lines[i] = llr.readLineWithNewline();
if (lines[3].Length >= 6)
{
System.String line4trimmed = lines[3].Trim();
if (line4trimmed.EndsWith("V2000") || line4trimmed.EndsWith("v2000") || line4trimmed.EndsWith("V3000"))
return "Mol";
try
{
System.Int32.Parse(lines[3].Substring(0, (3) - (0)).Trim());
System.Int32.Parse(lines[3].Substring(3, (6) - (3)).Trim());
return "Mol";
}
catch (System.FormatException nfe)
{
}
}
try
{
/*int atomCount = */
System.Int32.Parse(lines[0].Trim());
return "Xyz";
}
catch (System.FormatException e)
{
}
try
{
SupportClass.Tokenizer tokens = new SupportClass.Tokenizer(lines[0].Trim(), " \t");
if ((tokens != null) && (tokens.Count >= 2))
{
System.Int32.Parse(tokens.NextToken().Trim());
return "FoldingXyz";
}
}
catch (System.FormatException e)
{
//
}
// run these loops forward ... easier for people to understand
for (int i = 0; i < startsWithRecords.Length; ++i)
{
System.String[] recordTags = startsWithRecords[i];
for (int j = 0; j < recordTags.Length; ++j)
{
System.String recordTag = recordTags[j];
for (int k = 0; k < lines.Length; ++k)
{
if (lines[k].StartsWith(recordTag))
return startsWithFormats[i];
}
}
}
for (int i = 0; i < containsRecords.Length; ++i)
{
System.String[] recordTags = containsRecords[i];
for (int j = 0; j < recordTags.Length; ++j)
{
System.String recordTag = recordTags[j];
for (int k = 0; k < lines.Length; ++k)
{
if (lines[k].IndexOf(recordTag) != -1)
return containsFormats[i];
}
}
}
if (lines[1] == null || lines[1].Trim().Length == 0)
return "Jme"; // this is really quite broken :-)
return null;
}
