public XElement Generate(Profile profile)
{
write("<div xmlns=\"" + Hl7.Fhir.Support.XmlNs.XHTML + "\">");
if (profile.ExtensionDefn != null && profile.ExtensionDefn.Any())
{
write("<p><a name=\"i0\"><b>Extensions</b></a></p>\r\n");
write("<table class=\"dict\">\r\n");
foreach (var e in profile.ExtensionDefn)
{
generateExtension(profile, e);
}
write("</table>\r\n");
}
//if(profile.Structure != null && profile.Structure.Any())
int i = 1;
foreach (var s in profile.Structure)
{
generateStructure(profile, i, s);
i++;
}
write("</div>");
return XElement.Parse(xhtml.ToString());
}
public Profile.ProfileStructureComponent Expand(Profile.ProfileStructureComponent differential)
{
var baseStructure = _loader.LocateBaseStructure(differential.TypeElement);
if (baseStructure == null) throw Error.InvalidOperation("Could not locate the base profile for type {0}", differential.TypeElement.ToString());
var baseUri = StructureLoader.BuildBaseStructureUri(differential.TypeElement).ToString();
var snapshot = (Profile.ProfileStructureComponent)baseStructure.DeepCopy();
snapshot.SetStructureForm(StructureForm.Snapshot);
snapshot.SetStructureBaseUri(baseUri.ToString());
mergeStructure(snapshot, differential);
var fullDifferential = new DifferentialTreeConstructor(differential).MakeTree();
var snapNav = new ElementNavigator(snapshot);
snapNav.MoveToFirstChild();
var diffNav = new ElementNavigator(fullDifferential);
diffNav.MoveToFirstChild();
merge(snapNav, diffNav);
//TODO: Merge search params?
snapNav.CommitChanges();
return snapshot;
}
private void HarvestCardinality(Profile.ElementDefinitionComponent source, Element target)
{
Cardinality cardinality = new Cardinality();
cardinality.Min = source.Min.ToString();
cardinality.Max = source.Max;
target.Cardinality = cardinality;
}
private static Profile.ProfileStructureComponent locate(Profile profile, string anchor, Code type)
{
if(String.IsNullOrEmpty(anchor)) anchor = null;
IEnumerable<Profile.ProfileStructureComponent> results = null;
if (anchor == null && type == null)
{
// We have NO structure name and NO type hint. This is only unambiguous if there's just 1 structure in the profile
results = profile.Structure;
}
else if(anchor != null && type == null)
{
// We have a structure name but NO specific type. This is normally unambiguous, since the name should be unique
results = profile.Structure.Where(str => str.Name == anchor);
}
else if (anchor == null && type != null)
{
// We don't know the structure name but have it's type. This is unambiguous if there's just one structure of the given type
results = profile.Structure.Where(str => str.Type == type.Value);
}
else
{
// We have both the name and the type, this should also normally be unique
results = profile.Structure.Where(str => str.Name == anchor && str.Type == type.Value);
}
if (results.Count() <= 1)
return results.SingleOrDefault();
else
throw Error.InvalidOperation("Cannot unambiguously determine structure to locate based on the given combination of url, anchor and structure type");
}
public void Expand(Profile.ProfileStructureComponent structure)
{
if (structure.Differential == null) throw Error.Argument("structure", "structure does not contain a differential specification");
var differential = structure.Differential;
var baseStructure = _loader.LocateBaseStructure(structure.TypeElement);
if (baseStructure == null) throw Error.InvalidOperation("Could not locate the base profile for type {0}", structure.TypeElement.ToString());
if(baseStructure.Snapshot == null) throw Error.InvalidOperation("Base definition to use for expansion lacks a snapshot representation");
// var baseUri = StructureLoader.BuildBaseStructureUri(structure.TypeElement).ToString();
var snapshot = (Profile.ConstraintComponent)baseStructure.Snapshot.DeepCopy();
//DSTU1
//snapshot.SetStructureForm(StructureForm.Snapshot);
//snapshot.SetStructureBaseUri(baseUri.ToString());
//mergeStructure(snapshot, differential);
var fullDifferential = new DifferentialTreeConstructor(differential).MakeTree();
var snapNav = new ElementNavigator(snapshot);
snapNav.MoveToFirstChild();
var diffNav = new ElementNavigator(fullDifferential);
diffNav.MoveToFirstChild();
merge(snapNav, diffNav);
//TODO: Merge search params?
snapNav.CommitChanges();
structure.Snapshot = snapNav.Elements;
}
private void stashDifferentialStructure(Profile differential, Profile.ProfileStructureComponent structure)
{
structure.Name += "-differential";
structure.SetStructureForm(StructureForm.Differential);
structure.SetStructureBaseUri(StructureLoader.BuildBaseStructureUri(structure.TypeElement).ToString());
structure.Publish = false;
}
public XElement Generate(Profile profile, bool extensionsOnly)
{
var gen = new HierarchicalTableGenerator(_pkp);
var model = TableModel.CreateNormalTable();
genProfile(model.Rows, profile, extensionsOnly);
return gen.generate(model);
}
public XElement generate(Profile p, bool extensionsOnly)
{
var gen = new HierarchicalTableGenerator(OutputPath, InlineGraphics);
TableModel model = gen.initNormalTable();
genProfile(model.getRows(), p, extensionsOnly);
return gen.generate(model);
}
public XElement generateStructureTable(Profile.ProfileStructureComponent structure, bool diff, Profile profile)
{
HierarchicalTableGenerator gen = new HierarchicalTableGenerator(_pkp);
var model = TableModel.CreateNormalTable();
// List<Profile.ElementComponent> list = diff ? structure.getDifferential().getElement() : structure.getSnapshot().getElement(); DSTU2
var list = structure.Element;
var nav = new ElementNavigator(structure);
nav.MoveToFirstChild();
genElement(gen, model.Rows, nav, profile, true);
return gen.generate(model);
}
private void finalizeExtensions(Profile snapshot)
{
// Just a friendly helper method to add mandatory fields that are more or less boilerplate
foreach (var extensionDefn in snapshot.ExtensionDefn)
{
if (extensionDefn.Definition != null)
{
if (extensionDefn.Definition.Min == null) extensionDefn.Definition.Min = 0;
if (extensionDefn.Definition.Max == null) extensionDefn.Definition.Max = "1";
if (extensionDefn.Definition.IsModifier == null) extensionDefn.Definition.IsModifier = false;
}
}
}
public XElement generateStructureTable(String defFile, Profile.ProfileStructureComponent structure, bool diff, String imageFolder,
bool inlineGraphics, Profile profile, string profileUrl, String profileBaseFileName)
{
HierarchicalTableGenerator gen = new HierarchicalTableGenerator(imageFolder, inlineGraphics);
TableModel model = gen.initNormalTable();
// List<Profile.ElementComponent> list = diff ? structure.getDifferential().getElement() : structure.getSnapshot().getElement(); DSTU2
var list = structure.Element;
var nav = new ElementNavigator(structure);
nav.MoveToFirstChild();
genElement(defFile == null ? null : defFile+"#"+structure.Name+".", gen, model.getRows(), nav, profile, diff, profileUrl, profileBaseFileName);
return gen.generate(model);
}
private void HarvestConstraints(Profile.ElementDefinitionComponent source, Element target)
{
if (source.Constraint == null)
return;
foreach(Profile.ElementDefinitionConstraintComponent c in source.Constraint)
{
Constraint constraint = new Constraint();
constraint.Name = c.Name ?? c.Key;
constraint.XPath = c.Xpath;
constraint.HumanReadable = c.Human;
target.Constraints.Add(constraint);
}
}
private void genProfile(List<Row> rows, Profile profile, bool extensionsOnly)
{
if (!extensionsOnly)
{
var r = new Row();
rows.Add(r);
r.setIcon("icon_profile.png");
r.getCells().Add(new Cell(null, null, profile.Name, null, null));
r.getCells().Add(new Cell());
r.getCells().Add(new Cell(null, null, "Profile", null, null));
r.getCells().Add(new Cell(null, null, profile.Description, null, null));
foreach (var s in profile.Structure)
{
var re = new Row();
r.getSubRows().Add(re);
re.setIcon("icon_resource.png");
var structureUrl = _pkp.GetLinkForLocalStructure(profile, s);
re.getCells().Add(new Cell(null, structureUrl, s.Name, null, null));
re.getCells().Add(new Cell(null, null, "", null, null));
re.getCells().Add(new Cell(null, _pkp.GetLinkForTypeDocu(s.Type), s.Type, null, null));
re.getCells().Add(new Cell(null, null, s.Element[0].Definition.Short, null, null)); // DSTU1
//re.getCells().Add(new Cell(null, null, s.Base, null, null)); // DSTU2
}
}
if (profile.ExtensionDefn != null && (profile.ExtensionDefn.Any() || extensionsOnly))
{
var re = new Row();
rows.Add(re);
re.setIcon("icon_profile.png");
re.getCells().Add(new Cell(null, null, "Extensions", null, null));
re.getCells().Add(new Cell());
re.getCells().Add(new Cell());
re.getCells().Add(new Cell(null, null, "Extensions defined by this profile", null, null)); // DSTU1
//re.getCells().Add(new Cell(null, null, "Extensions defined by the URL \"" + profile.Url + "\"", null, null)); // DSTU2
foreach (var ext in profile.ExtensionDefn)
{
genExtension(re.getSubRows(), profile, ext, true);
}
}
}
public static bool AppendChild(this BaseElementNavigator nav, Profile.ElementComponent child)
{
var bm = nav.Bookmark();
if (nav.MoveToFirstChild())
{
while (nav.MoveToNext()) ;
var result = nav.InsertAfter(child);
if(!result) nav.ReturnToBookmark(bm);
return result;
}
else
{
return nav.InsertFirstChild(child);
}
}
private static String conf(Profile.ElementDefinitionBindingComponent def)
{
if (def.Conformance == null)
return "For codes, see ";
switch (def.Conformance)
{
case Profile.BindingConformance.Example:
return "For example codes, see ";
case Profile.BindingConformance.Preferred:
return "The codes SHOULD be taken from ";
case Profile.BindingConformance.Required:
return "The codes SHALL be taken from ";
default:
return "??";
}
}
private void HarvestBinding(Profile.ElementDefinitionComponent source, Element target)
{
if (source.Binding != null)
{
var reference = source.Binding.Reference;
if (reference is ResourceReference)
{
// todo: dit deel is nog niet getest.
target.BindingUri = (reference as ResourceReference).Url.ToString();
}
else if (reference is FhirUri)
{
target.BindingUri = (reference as FhirUri).Value;
}
}
}
public void Expand(Profile profile)
{
// Assure there's a text element, even if there's none in the differential
if (profile.Text == null)
{
profile.Text = new Narrative() { Status = Narrative.NarrativeStatus.Empty };
profile.Text.Div = "<div xmlns='http://www.w3.org/1999/xhtml'>No narrative was supplied for this Profile</div>";
}
// We leave the globally defined Queries, Extensions and Mappings alone, the
// only thing we expand are the Structures
if (profile.Structure != null)
{
foreach (var structureToExpand in profile.Structure)
{
expandStructure(structureToExpand);
}
}
finalizeExtensions(profile);
}
public Profile Expand(Profile differential)
{
// Start by making a full copy of the differential
var snapshot = (Profile)differential.DeepCopy();
// Assure there's a text element, even if there's none in the differential
if (snapshot.Text == null)
{
snapshot.Text = new Narrative() { Status = Narrative.NarrativeStatus.Empty };
snapshot.Text.Div = "<div xmlns='http://www.w3.org/1999/xhtml'>No narrative was supplied for this Profile</div>";
}
// We leave the globally defined Queries, Extensions and Mappings alone, the
// only thing we expand are the Structures
if (snapshot.Structure != null)
{
var differentialStructures = snapshot.Structure.ToList();
foreach (var differentialStructure in differentialStructures)
{
// keep the differential form in the snapshot profile, as an unpublished copy
//stashDifferentialStructure(snapshot, differentialStructure);
// Instead of keeping it, remove the original differential form
snapshot.Structure.Remove(differentialStructure);
// add the expanded differential structure in the new snapshot form
snapshot.Structure.Add( expandStructure(differentialStructure) );
}
}
finalizeExtensions(snapshot);
return snapshot;
}
/// <summary>
/// Inserts the element passed in as a child of the element the navigator is currently on.
/// The navigator will move to the inserted element.
/// </summary>
/// <param name="sibling"></param>
/// <returns></returns>
/// <remarks>You can only insert a child for an element does not have children yet.</remarks>
public override bool InsertFirstChild(Profile.ElementComponent child)
{
if(Count == 0)
{
// Special case, insert a new root
_elements.Add(child);
child.Path = child.GetNameFromPath();
OrdinalPosition = 0;
return true;
}
else if(HasChildren)
return false; // Cannot insert another child, there's already one.
else
{
var newSiblingPath = Path + "." + child.GetNameFromPath();
if (OrdinalPosition == Count - 1) // At last position
_elements.Add(child);
else
_elements.Insert(OrdinalPosition.Value + 1, child);
// Set the name to be a true child -> this actually creates a child
child.Path = newSiblingPath;
// Navigate to newly inserted child
OrdinalPosition += 1;
return true;
}
}
private static ElementNavigator resolveNameReference(Profile.ProfileStructureComponent structure, string nameReference)
{
return structure.JumpToNameReference(nameReference);
}
private static String confTail(Profile.ElementDefinitionBindingComponent def)
{
//TODO: Note: I think the Java implmentation assumes a default of "false" here for IsExtensible...
if (def.Conformance == Profile.BindingConformance.Preferred || (def.Conformance == Profile.BindingConformance.Required && def.IsExtensible.GetValueOrDefault(false)))
return "; other codes may be used where these codes are not suitable";
else
return "";
}
private static bool isSlicedToOne(Profile.ElementComponent element)
{
// Note that in DSTU1, Slicing and Definition cannot both be non-null, but this is an error, and we really
// need an Definition on a Slice entry element as well.
return element.Slicing != null &&
element.Definition != null &&
element.Definition.Max == "1";
}
private void mergeElementDefnAttributes(Profile.ElementDefinitionComponent snap, Profile.ElementDefinitionComponent diff)
{
if (diff.ShortElement != null) snap.ShortElement = (FhirString)diff.ShortElement.DeepCopy();
if (diff.FormalElement != null) snap.FormalElement = (FhirString)diff.FormalElement.DeepCopy();
if (diff.CommentsElement != null) snap.CommentsElement = (FhirString)diff.CommentsElement.DeepCopy();
if (diff.RequirementsElement != null) snap.RequirementsElement = (FhirString)diff.RequirementsElement.DeepCopy();
if(diff.SynonymElement != null)
{
if(snap.SynonymElement == null) snap.SynonymElement = new List<FhirString>();
// Add new synonyms to the snap, and replace existing ones
foreach(var dsyn in diff.SynonymElement)
{
snap.SynonymElement.Remove(snap.SynonymElement.FirstOrDefault(ssyn => ssyn.Value == dsyn.Value));
snap.SynonymElement.Add((FhirString)dsyn.DeepCopy());
}
// Original code from Java leaves snapshot untouched when encountering an existing synonym,but
// this means differential can not override e.g. extensions in such synonyms.
//var newSynonyms = from dsyn in diff.SynonymElement
// where !snap.SynonymElement.Any(ssyn => ssyn.Value == dsyn.Value)
// select (FhirString)dsyn.DeepCopy();
//snap.SynonymElement.AddRange(newSynonyms);
}
if (diff.MinElement != null) snap.MinElement = (Integer)diff.MinElement.DeepCopy();
if (diff.MaxElement != null) snap.MaxElement = (FhirString)diff.MaxElement.DeepCopy();
// ElementDefinition.nameReference cannot be overridden by a derived profile
if(diff.Fixed != null) snap.Fixed = (Element)diff.Fixed.DeepCopy();
if (diff.Pattern != null) snap.Pattern = (Element)diff.Pattern.DeepCopy();
if(diff.Example != null) snap.Example = (Element)diff.Example.DeepCopy();
if(diff.MaxLengthElement != null) snap.MaxLengthElement = (Integer)diff.MaxLengthElement.DeepCopy();
// todo: [GG] what to do about conditions? [EK] Since me made ElementDefinition.Constrain cumulative, these need to be cumulative too?
if (diff.ConditionElement != null && diff.ConditionElement.Any())
{
if (snap.ConditionElement == null) snap.ConditionElement = new List<Id>();
snap.ConditionElement.AddRange(diff.ConditionElement.DeepCopy());
}
if(diff.MustSupportElement != null) snap.MustSupportElement = (FhirBoolean)diff.MustSupportElement.DeepCopy();
// ElementDefinition.isModifier cannot be overridden by a derived profle
if (diff.IsSummaryElement != null) snap.IsSummaryElement = (FhirBoolean)diff.IsSummaryElement.DeepCopy();
if(diff.Binding != null) snap.Binding = (Profile.ElementDefinitionBindingComponent)diff.Binding.DeepCopy();
// todo: [GG] is this actually right? [EK] I think it is, at least this is what Forge expects as well
if(diff.Type != null && diff.Type.Any())
snap.Type = new List<Profile.TypeRefComponent>(diff.Type.DeepCopy());
// todo: [GG] mappings are cumulative - or does one replace another?
if(diff.Mapping != null && diff.Mapping.Any())
{
if(snap.Mapping == null) snap.Mapping = new List<Profile.ElementDefinitionMappingComponent>();
snap.Mapping.AddRange(diff.Mapping.DeepCopy());
}
// todo: constraints are cumulative - or does one replace another?
if(diff.Constraint != null && diff.Constraint.Any())
{
if(snap.Constraint == null) snap.Constraint = new List<Profile.ElementDefinitionConstraintComponent>();
snap.Constraint.AddRange(diff.Constraint.DeepCopy());
}
}
private Profile.ElementComponent createSliceEntry(Profile.ElementComponent baseDefn, Profile.ElementComponent diff)
{
var slicingEntry = new Profile.ElementComponent();
slicingEntry.PathElement = (FhirString)baseDefn.PathElement.DeepCopy();
if (diff.Name != null) slicingEntry.NameElement = (FhirString)diff.NameElement.DeepCopy();
if (diff.Slicing != null) slicingEntry.Slicing = (Profile.ElementSlicingComponent)diff.Slicing.DeepCopy();
slicingEntry.Definition = (Profile.ElementDefinitionComponent)baseDefn.Definition.DeepCopy();
// If the differential overrides the elementdefn, only some of the fields go into the slicing entry
if (diff.Definition != null)
{
if (diff.Definition.CommentsElement != null) slicingEntry.Definition.CommentsElement = (FhirString)diff.Definition.CommentsElement.DeepCopy();
if (diff.Definition.ShortElement != null) slicingEntry.Definition.ShortElement = (FhirString)diff.Definition.ShortElement.DeepCopy();
if (diff.Definition.FormalElement != null) slicingEntry.Definition.FormalElement = (FhirString)diff.Definition.FormalElement.DeepCopy();
if (diff.Definition.MinElement != null) slicingEntry.Definition.MinElement = (Integer)diff.Definition.MinElement.DeepCopy();
if (diff.Definition.MaxElement != null) slicingEntry.Definition.MaxElement = (FhirString)diff.Definition.MaxElement.DeepCopy();
}
return slicingEntry;
}
private void mergeElementAttributes(Profile.ElementComponent dest, Profile.ElementComponent src)
{
// Check whether this is an empty parent inserted into the differential form to create a full tree representation
// without skips
var isFillerParent = src.Definition == null && src.Slicing == null;
if (isFillerParent) return; // nothing to do, parent remains unchanged
if (src.Name != null) dest.Name = src.Name;
// You cannot change Element.representation in a derived profile
if (src.Definition != null)
{
if (dest.Definition == null) dest.Definition = new Profile.ElementDefinitionComponent();
mergeElementDefnAttributes(dest.Definition, src.Definition);
}
if(src.Slicing != null) dest.Slicing = (Profile.ElementSlicingComponent)src.Slicing.DeepCopy();
}
private Profile.ElementComponent createExtensionSlicingEntry(string path, Profile.ElementComponent template)
{
// Create a pre-fab extension slice, filled with sensible defaults
// Extensions will repeat their definitions in their slicing entry
var result = (Profile.ElementComponent)template.DeepCopy();
//var result = new Profile.ElementComponent();
//result.Path = path;
result.Slicing = new Profile.ElementSlicingComponent();
result.Slicing.Discriminator = new[] {"url"};
result.Slicing.Ordered = false;
result.Slicing.Rules = Profile.SlicingRules.Open;
return result;
}
/// <summary>
/// Parse Profile
/// </summary>
public static Hl7.Fhir.Model.Profile ParseProfile(IFhirReader reader, ErrorList errors, Hl7.Fhir.Model.Profile existingInstance = null)
{
Hl7.Fhir.Model.Profile result = existingInstance != null ? existingInstance : new Hl7.Fhir.Model.Profile();
string currentElementName = reader.CurrentElementName;
reader.EnterElement();
while (reader.HasMoreElements())
{
var atName = reader.CurrentElementName;
// Parse element extension
if (atName == "extension")
{
result.Extension = new List <Hl7.Fhir.Model.Extension>();
reader.EnterArray();
while (ParserUtils.IsAtArrayElement(reader, "extension"))
{
result.Extension.Add(ExtensionParser.ParseExtension(reader, errors));
}
reader.LeaveArray();
}
// Parse element language
else if (atName == "language")
{
result.LanguageElement = CodeParser.ParseCode(reader, errors);
}
// Parse element text
else if (atName == "text")
{
result.Text = NarrativeParser.ParseNarrative(reader, errors);
}
// Parse element contained
else if (atName == "contained")
{
result.Contained = new List <Hl7.Fhir.Model.Resource>();
reader.EnterArray();
while (ParserUtils.IsAtArrayElement(reader, "contained"))
{
result.Contained.Add(ParserUtils.ParseContainedResource(reader, errors));
}
reader.LeaveArray();
}
// Parse element _id
else if (atName == "_id")
{
result.LocalIdElement = Id.Parse(reader.ReadPrimitiveContents(typeof(Id)));
}
// Parse element identifier
else if (atName == "identifier")
{
result.IdentifierElement = FhirStringParser.ParseFhirString(reader, errors);
}
// Parse element version
else if (atName == "version")
{
result.VersionElement = FhirStringParser.ParseFhirString(reader, errors);
}
// Parse element name
else if (atName == "name")
{
result.NameElement = FhirStringParser.ParseFhirString(reader, errors);
}
// Parse element publisher
else if (atName == "publisher")
{
result.PublisherElement = FhirStringParser.ParseFhirString(reader, errors);
}
// Parse element telecom
else if (atName == "telecom")
{
result.Telecom = new List <Hl7.Fhir.Model.Contact>();
reader.EnterArray();
while (ParserUtils.IsAtArrayElement(reader, "telecom"))
{
result.Telecom.Add(ContactParser.ParseContact(reader, errors));
}
reader.LeaveArray();
}
// Parse element description
else if (atName == "description")
{
result.DescriptionElement = FhirStringParser.ParseFhirString(reader, errors);
}
// Parse element code
else if (atName == "code")
{
result.Code = new List <Hl7.Fhir.Model.Coding>();
reader.EnterArray();
while (ParserUtils.IsAtArrayElement(reader, "code"))
{
result.Code.Add(CodingParser.ParseCoding(reader, errors));
}
reader.LeaveArray();
}
// Parse element status
else if (atName == "status")
{
result.StatusElement = CodeParser.ParseCode <Hl7.Fhir.Model.Profile.ResourceProfileStatus>(reader, errors);
}
// Parse element experimental
else if (atName == "experimental")
{
result.ExperimentalElement = FhirBooleanParser.ParseFhirBoolean(reader, errors);
}
// Parse element date
else if (atName == "date")
{
result.DateElement = FhirDateTimeParser.ParseFhirDateTime(reader, errors);
}
// Parse element fhirVersion
else if (atName == "fhirVersion")
{
result.FhirVersionElement = IdParser.ParseId(reader, errors);
}
// Parse element structure
else if (atName == "structure")
{
result.Structure = new List <Hl7.Fhir.Model.Profile.ProfileStructureComponent>();
reader.EnterArray();
while (ParserUtils.IsAtArrayElement(reader, "structure"))
{
result.Structure.Add(ProfileParser.ParseProfileStructureComponent(reader, errors));
}
reader.LeaveArray();
}
// Parse element extensionDefn
else if (atName == "extensionDefn")
{
result.ExtensionDefn = new List <Hl7.Fhir.Model.Profile.ProfileExtensionDefnComponent>();
reader.EnterArray();
while (ParserUtils.IsAtArrayElement(reader, "extensionDefn"))
{
result.ExtensionDefn.Add(ProfileParser.ParseProfileExtensionDefnComponent(reader, errors));
}
reader.LeaveArray();
}
// Parse element binding
else if (atName == "binding")
{
result.Binding = new List <Hl7.Fhir.Model.Profile.ProfileBindingComponent>();
reader.EnterArray();
while (ParserUtils.IsAtArrayElement(reader, "binding"))
{
result.Binding.Add(ProfileParser.ParseProfileBindingComponent(reader, errors));
}
reader.LeaveArray();
}
else
{
errors.Add(String.Format("Encountered unknown element {0} while parsing {1}", reader.CurrentElementName, currentElementName), reader);
reader.SkipSubElementsFor(currentElementName);
result = null;
}
}
reader.LeaveElement();
return(result);
}
private String describeExtensionContext(Profile.ProfileExtensionDefnComponent ext)
{
switch (ext.ContextType)
{
case Profile.ExtensionContext.Datatype:
return "Use on data type: " + ext.DescribeContext();
case Profile.ExtensionContext.Extension:
return "Use on extension: " + ext.DescribeContext();
case Profile.ExtensionContext.Resource:
return "Use on resource: " + ext.DescribeContext();
case Profile.ExtensionContext.Mapping:
return "Use where element has mapping: " + ext.DescribeContext();
}
return null;
}
public void Prepare()
{
var str = this.GetType().Assembly.GetManifestResourceStream("Hl7.Fhir.Test.profile.profile.xml");
profile = (Profile)FhirParser.ParseResource(XmlReader.Create(str));
}
/// <summary>
/// Inserts the element passed in as a sibling to the element the navigator is currently on.
/// The navigator will move to the inserted element.
/// </summary>
/// <param name="sibling"></param>
/// <returns></returns>
public override bool InsertAfter(Profile.ElementComponent sibling)
{
if (!canInsertSiblingHere()) return false;
var insertPosition = positionAfter();
var newSiblingPath = ParentPath + "." + sibling.GetNameFromPath();
if (insertPosition == Count) // At last position
_elements.Add(sibling);
else
_elements.Insert(insertPosition, sibling);
// Adjust the sibling's path so it's parent is the same as the current node
sibling.Path = newSiblingPath;
// Navigate to newly inserted node
OrdinalPosition = insertPosition;
return true;
}
public static void SerializeProfile(Hl7.Fhir.Model.Profile value, IFhirWriter writer, bool summary)
{
writer.WriteStartRootObject("Profile");
writer.WriteStartComplexContent();
// Serialize element _id
if (value.LocalIdElement != null)
{
writer.WritePrimitiveContents("_id", value.LocalIdElement, XmlSerializationHint.Attribute);
}
// Serialize element extension
if (value.Extension != null && !summary && value.Extension.Count > 0)
{
writer.WriteStartArrayElement("extension");
foreach (var item in value.Extension)
{
writer.WriteStartArrayMember("extension");
ExtensionSerializer.SerializeExtension(item, writer, summary);
writer.WriteEndArrayMember();
}
writer.WriteEndArrayElement();
}
// Serialize element language
if (value.LanguageElement != null && !summary)
{
writer.WriteStartElement("language");
CodeSerializer.SerializeCode(value.LanguageElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element text
if (value.Text != null && !summary)
{
writer.WriteStartElement("text");
NarrativeSerializer.SerializeNarrative(value.Text, writer, summary);
writer.WriteEndElement();
}
// Serialize element contained
if (value.Contained != null && !summary && value.Contained.Count > 0)
{
writer.WriteStartArrayElement("contained");
foreach (var item in value.Contained)
{
writer.WriteStartArrayMember("contained");
FhirSerializer.SerializeResource(item, writer, summary);
writer.WriteEndArrayMember();
}
writer.WriteEndArrayElement();
}
// Serialize element identifier
if (value.IdentifierElement != null)
{
writer.WriteStartElement("identifier");
FhirStringSerializer.SerializeFhirString(value.IdentifierElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element version
if (value.VersionElement != null)
{
writer.WriteStartElement("version");
FhirStringSerializer.SerializeFhirString(value.VersionElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element name
if (value.NameElement != null)
{
writer.WriteStartElement("name");
FhirStringSerializer.SerializeFhirString(value.NameElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element publisher
if (value.PublisherElement != null)
{
writer.WriteStartElement("publisher");
FhirStringSerializer.SerializeFhirString(value.PublisherElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element telecom
if (value.Telecom != null && value.Telecom.Count > 0)
{
writer.WriteStartArrayElement("telecom");
foreach (var item in value.Telecom)
{
writer.WriteStartArrayMember("telecom");
ContactSerializer.SerializeContact(item, writer, summary);
writer.WriteEndArrayMember();
}
writer.WriteEndArrayElement();
}
// Serialize element description
if (value.DescriptionElement != null)
{
writer.WriteStartElement("description");
FhirStringSerializer.SerializeFhirString(value.DescriptionElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element code
if (value.Code != null && value.Code.Count > 0)
{
writer.WriteStartArrayElement("code");
foreach (var item in value.Code)
{
writer.WriteStartArrayMember("code");
CodingSerializer.SerializeCoding(item, writer, summary);
writer.WriteEndArrayMember();
}
writer.WriteEndArrayElement();
}
// Serialize element status
if (value.StatusElement != null)
{
writer.WriteStartElement("status");
CodeSerializer.SerializeCode <Hl7.Fhir.Model.Profile.ResourceProfileStatus>(value.StatusElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element experimental
if (value.ExperimentalElement != null)
{
writer.WriteStartElement("experimental");
FhirBooleanSerializer.SerializeFhirBoolean(value.ExperimentalElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element date
if (value.DateElement != null)
{
writer.WriteStartElement("date");
FhirDateTimeSerializer.SerializeFhirDateTime(value.DateElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element fhirVersion
if (value.FhirVersionElement != null)
{
writer.WriteStartElement("fhirVersion");
IdSerializer.SerializeId(value.FhirVersionElement, writer, summary);
writer.WriteEndElement();
}
// Serialize element structure
if (value.Structure != null && !summary && value.Structure.Count > 0)
{
writer.WriteStartArrayElement("structure");
foreach (var item in value.Structure)
{
writer.WriteStartArrayMember("structure");
ProfileSerializer.SerializeProfileStructureComponent(item, writer, summary);
writer.WriteEndArrayMember();
}
writer.WriteEndArrayElement();
}
// Serialize element extensionDefn
if (value.ExtensionDefn != null && !summary && value.ExtensionDefn.Count > 0)
{
writer.WriteStartArrayElement("extensionDefn");
foreach (var item in value.ExtensionDefn)
{
writer.WriteStartArrayMember("extensionDefn");
ProfileSerializer.SerializeProfileExtensionDefnComponent(item, writer, summary);
writer.WriteEndArrayMember();
}
writer.WriteEndArrayElement();
}
// Serialize element binding
if (value.Binding != null && !summary && value.Binding.Count > 0)
{
writer.WriteStartArrayElement("binding");
foreach (var item in value.Binding)
{
writer.WriteStartArrayMember("binding");
ProfileSerializer.SerializeProfileBindingComponent(item, writer, summary);
writer.WriteEndArrayMember();
}
writer.WriteEndArrayElement();
}
writer.WriteEndComplexContent();
writer.WriteEndRootObject();
}
private void genExtension(List<Row> rows, Profile profile, Profile.ProfileExtensionDefnComponent ext, bool root)
{
var r = new Row();
rows.Add(r);
r.setAnchor(ext.Code);
r.setIcon("icon_extension_simple.png"); // DSTU1
//if (ext.getChildren().isEmpty()) // DSTU2
// r.setIcon("icon_extension_simple.png");
//else
//r.setIcon("icon_extension_complex.png");
var extensionUrl = _pkp.GetLinkForExtensionDefinition(profile, ext);
r.getCells().Add(new Cell(null, null, ext.Code, null, null));
r.getCells().Add(new Cell(null, null, ext.Definition.DescribeCardinality(), null, null)); //TODO: create rendering extension
r.getCells().Add(new Cell(null, null, ext.Definition.DescribeTypeCode(), null, null)); //TODO: create rendering extension
// r.getCells().add(gen.new Cell(null, null, ext.getDefinition().getShortDefn(), null, null));
// if (root)
// r.getCells().add(gen.new Cell(null, null, describeExtensionContext(ext), null, null));
// else
// r.getCells().add(gen.new Cell());
if (root)
{
r.getCells().Add(new Cell(null, null, ext.Definition.Short, null, null)
.addPiece(new Piece("br"))
.addPiece(new Piece(null, describeExtensionContext(ext), null)));
}
else
{
r.getCells().Add(new Cell(null, null, ext.Definition.Short, null, null));
}
//foreach (var child in ext.Children) // DSTU2
//{
// genExtension(gen, r.getSubRows(), child, false);
//}
}