/// <summary>
/// Formats the score into a bed file line.
/// </summary>
/// <returns>The score bed file line.</returns>
/// <param name="scoreData">Score data.</param>
/// <param name="location">Location.</param>
/// <param name="distance">Distance.</param>
protected override string FormatScoreTsvLine(MapBuilderData.BaseLinkScore scoreData, Genomics.Location location, int distance)
{
return(string.Format("{0}\t{1}\t{2}\t{3}\t{4}\t{5}\t{6}\t{7}\t{8}\t{9}\t{10}\t{11}",
location.Chromosome,
location.DirectionalStart,
location.DirectionalStart,
scoreData.Tss,
1.0,
location.Strand,
scoreData.Locus,
0.0,
1.0,
distance,
"None",
location.AlternateName));
}
/// <summary> /// Formats the score into a bed file line. /// </summary> /// <returns>The score bed file line.</returns> /// <param name="scoreData">Score data.</param> /// <param name="location">Location.</param> /// <param name="distance">Distance.</param> abstract protected string FormatScoreTsvLine(TLinkScore scoreData, Genomics.Location location, int distance);
