Exemple #1
0
        /// <summary>
        ///
        /// </summary>
        /// <param name="interfaceInfo"></param>
        /// <param name="asymLigandsHash"></param>
        /// <returns></returns>
        private Dictionary <string, AtomInfo[]>[] GetInterfaceLigandAtomInfoHashes(ProtInterfaceInfo interfaceInfo, Dictionary <string, string[]> asymLigandsHash, Dictionary <string, AtomInfo[]> entryChainsHash)
        {
            Dictionary <string, AtomInfo[]>[] ligandAtomInfoHashes = new Dictionary <string, AtomInfo[]> [2];
            string[] ligandChains1 = asymLigandsHash[interfaceInfo.Chain1];
            Dictionary <string, AtomInfo[]> ligandAtomInfoHash1 = new Dictionary <string, AtomInfo[]>();
            string ligandSymOpString = "";

            foreach (string ligandChain in ligandChains1)
            {
                ligandSymOpString = ligandChain + "_" + interfaceInfo.SymmetryString1;
                if (entryChainsHash.ContainsKey(ligandSymOpString))
                {
                    ligandAtomInfoHash1.Add(ligandSymOpString, entryChainsHash[ligandSymOpString]);
                }
            }
            ligandAtomInfoHashes[0] = ligandAtomInfoHash1;
            string[] ligandChains2 = asymLigandsHash[interfaceInfo.Chain2];
            Dictionary <string, AtomInfo[]> ligandAtomInfoHash2 = new Dictionary <string, AtomInfo[]>();

            foreach (string ligandChain in ligandChains2)
            {
                ligandSymOpString = ligandChain + "_" + interfaceInfo.SymmetryString2;
                if (entryChainsHash.ContainsKey(ligandSymOpString))
                {
                    ligandAtomInfoHash2.Add(ligandSymOpString, (AtomInfo[])entryChainsHash[ligandSymOpString]);
                }
            }
            ligandAtomInfoHashes[1] = ligandAtomInfoHash2;
            return(ligandAtomInfoHashes);
        }
Exemple #2
0
 public ProtInterface(ProtInterfaceInfo interfaceInfo)
 {
     this.ASA              = interfaceInfo.ASA;
     this.Chain1           = interfaceInfo.Chain1;
     this.Chain2           = interfaceInfo.Chain2;
     this.ExistType        = interfaceInfo.ExistType;
     this.InterfaceId      = interfaceInfo.InterfaceId;
     this.Remark           = interfaceInfo.Remark;
     this.ResiduesInChain1 = interfaceInfo.ResiduesInChain1;
     this.ResiduesInChain2 = interfaceInfo.ResiduesInChain2;
     this.SymmetryString1  = interfaceInfo.SymmetryString1;
     this.SymmetryString2  = interfaceInfo.SymmetryString2;
 }