|
public static ParseModificationLine ( string line ) : int>>.IEnumerable |
||
| line | string | |
| Résultat | int>>.IEnumerable | |
/// <summary>
/// Parse and apply an omssa modification line to this current amino acid polymer
/// </summary>
/// <param name="aap"></param>
/// <param name="omssaModificationLine"></param>
/// <returns></returns>
public static AminoAcidPolymer SetModifications(this AminoAcidPolymer aap, string omssaModificationLine)
{
if (string.IsNullOrEmpty(omssaModificationLine))
{
return(aap);
}
foreach (Tuple <Modification, int> modPosition in OmssaModification.ParseModificationLine(omssaModificationLine))
{
int pos = modPosition.Item2;
if (pos == 0)
{
aap.NTerminusModification = modPosition.Item1;
}
else if (pos == aap.Length + 1)
{
aap.CTerminusModification = modPosition.Item1;
}
else
{
aap.SetModification(modPosition.Item1, pos);
}
}
return(aap);
}
public static AminoAcidPolymer SetModifications(this AminoAcidPolymer aap, string mods)
{
if (string.IsNullOrEmpty(mods))
{
return(aap);
}
foreach (Tuple <Modification, int> modPosition in OmssaModification.ParseModificationLine(mods))
{
aap.SetModification(modPosition.Item1, modPosition.Item2);
}
return(aap);
}
