public void ValidateSAMFormatterFormatString()
{
string filePath = utilityObj.xmlUtil.GetTextValue(
Constants.SamFormatterFileNode,
Constants.FilePathNode);
ISequenceAlignmentParser parser = new SAMParser();
IList<ISequenceAlignment> alignment = parser.Parse(filePath).ToList();
SAMFormatter formatter = new SAMFormatter();
string writer = formatter.FormatString(alignment[0]);
Assert.AreEqual(writer, Constants.FormatterString.Replace("\r\n", Environment.NewLine));
}
