public void Serialize(object obj, Altaxo.Serialization.Xml.IXmlSerializationInfo info)
{
XYFunctionPlotItem s = (XYFunctionPlotItem)obj;
info.AddValue("Data", s._plotData);
info.AddValue("Style", s._plotStyles);
}
/// <summary>
/// Serializes XYColumnPlotItem Version 0.
/// </summary>
/// <param name="obj">The XYColumnPlotItem to serialize.</param>
/// <param name="info">The serialization info.</param>
/// <param name="context">The streaming context.</param>
public void GetObjectData(object obj, System.Runtime.Serialization.SerializationInfo info, System.Runtime.Serialization.StreamingContext context)
{
XYFunctionPlotItem s = (XYFunctionPlotItem)obj;
info.AddValue("Data", s._plotData);
info.AddValue("Style", s._plotStyles);
}
/// <summary>
/// Deserializes the XYColumnPlotItem Version 0.
/// </summary>
/// <param name="obj">The empty XYColumnPlotItem object to deserialize into.</param>
/// <param name="info">The serialization info.</param>
/// <param name="context">The streaming context.</param>
/// <param name="selector">The deserialization surrogate selector.</param>
/// <returns>The deserialized XYColumnPlotItem.</returns>
public object SetObjectData(object obj, System.Runtime.Serialization.SerializationInfo info, System.Runtime.Serialization.StreamingContext context, System.Runtime.Serialization.ISurrogateSelector selector)
{
XYFunctionPlotItem s = (XYFunctionPlotItem)obj;
s._plotData = (XYFunctionPlotData)info.GetValue("Data", typeof(XYColumnPlotData));
s._plotStyles = (G2DPlotStyleCollection)info.GetValue("Style", typeof(G2DPlotStyleCollection));
return(s);
}
protected override void CopyFrom(PlotItem fromb)
{
base.CopyFrom(fromb);
XYFunctionPlotItem from = fromb as XYFunctionPlotItem;
if (from != null)
{
this.Data = from.Data;
}
}
public object Deserialize(object o, Altaxo.Serialization.Xml.IXmlDeserializationInfo info, object parent)
{
XYFunctionPlotData pa = (XYFunctionPlotData)info.GetValue("Data", typeof(XYColumnPlotData));
G2DPlotStyleCollection ps = (G2DPlotStyleCollection)info.GetValue("Style", typeof(G2DPlotStyleCollection));
if (null == o)
{
return(new XYFunctionPlotItem(pa, ps));
}
else
{
XYFunctionPlotItem s = (XYFunctionPlotItem)o;
s.Data = pa;
s.Style = ps;
return(s);
}
}
public object Deserialize(object o, Altaxo.Serialization.Xml.IXmlDeserializationInfo info, object parent)
{
XYFunctionPlotData pa = (XYFunctionPlotData)info.GetValue("Data", typeof(XYColumnPlotData));
XYLineScatterPlotStyle lsps = (XYLineScatterPlotStyle)info.GetValue("Style", typeof(XYLineScatterPlotStyle));
G2DPlotStyleCollection ps = new G2DPlotStyleCollection();
ps.Add(new ScatterPlotStyle(lsps.ScatterStyle));
ps.Add(new LinePlotStyle(lsps.XYPlotLineStyle));
if (null == o)
{
return(new XYFunctionPlotItem(pa, ps));
}
else
{
XYFunctionPlotItem s = (XYFunctionPlotItem)o;
s.Data = pa;
s.Style = ps;
return(s);
}
}
public override void Run(Altaxo.Graph.GUI.GraphController ctrl)
{
FunctionEvaluationScript script = null; //
if(script==null)
script = new FunctionEvaluationScript();
object[] args = new object[]{script,new ScriptExecutionHandler(this.EhScriptExecution)};
if(Current.Gui.ShowDialog(args, "Function script"))
{
ctrl.EnsureValidityOfCurrentLayerNumber();
script = (FunctionEvaluationScript)args[0];
XYFunctionPlotItem functItem = new XYFunctionPlotItem(new XYFunctionPlotData(script),new G2DPlotStyleCollection(LineScatterPlotStyleKind.Line));
ctrl.Doc.Layers[ctrl.CurrentLayerNumber].PlotItems.Add(functItem);
}
}
public void OnAfterFittingStep()
{
if (_view != null)
_view.SetChiSquare(this._chiSquare);
if (_doc.FitContext is Altaxo.Graph.GUI.GraphController)
{
// for every dependent variable in the FitEnsemble, create a function graph
Altaxo.Graph.GUI.GraphController graph = _doc.FitContext as Altaxo.Graph.GUI.GraphController;
int funcNumber = 0;
for (int i = 0; i < _doc.FitEnsemble.Count; i++)
{
FitElement fitEle = _doc.FitEnsemble[i];
for (int k = 0; k < fitEle.NumberOfDependentVariables; k++, funcNumber++)
{
if (funcNumber < _functionPlotItems.Count && _functionPlotItems[funcNumber] != null)
{
XYFunctionPlotItem plotItem = (XYFunctionPlotItem)_functionPlotItems[funcNumber];
FitFunctionToScalarFunctionDDWrapper wrapper = (FitFunctionToScalarFunctionDDWrapper)plotItem.Data.Function;
wrapper.Initialize(fitEle.FitFunction, k, 0, _doc.GetParametersForFitElement(i));
}
else
{
FitFunctionToScalarFunctionDDWrapper wrapper = new FitFunctionToScalarFunctionDDWrapper(fitEle.FitFunction, k, _doc.GetParametersForFitElement(i));
XYFunctionPlotData plotdata = new XYFunctionPlotData(wrapper);
XYFunctionPlotItem plotItem = new XYFunctionPlotItem(plotdata, new G2DPlotStyleCollection(LineScatterPlotStyleKind.Line));
graph.ActiveLayer.PlotItems.Add(plotItem);
_functionPlotItems.Add(plotItem);
}
}
}
// if there are more elements in _functionPlotItems, remove them from the graph
for (int i = _functionPlotItems.Count - 1; i >= funcNumber; --i)
{
if (_functionPlotItems[i] != null)
{
graph.ActiveLayer.PlotItems.Remove((IGPlotItem)_functionPlotItems[i]);
_functionPlotItems.RemoveAt(i);
}
}
graph.RefreshGraph();
}
}
public XYFunctionPlotItem(XYFunctionPlotItem from)
{
CopyFrom((PlotItem)from);
}
public override void Run(GraphController ctrl)
{
HostLayer activeLayer;
ctrl.Doc.RootLayer.IsValidIndex(ctrl.CurrentLayerNumber, out activeLayer);
if (!(activeLayer is XYPlotLayer))
return;
FunctionEvaluationScript script = null; //
if (script == null)
script = new FunctionEvaluationScript();
object[] args = new object[] { script, new ScriptExecutionHandler(this.EhScriptExecution) };
if (Current.Gui.ShowDialog(args, "Function script"))
{
ctrl.EnsureValidityOfCurrentLayerNumber();
script = (FunctionEvaluationScript)args[0];
XYFunctionPlotItem functItem = new XYFunctionPlotItem(new XYFunctionPlotData(script), new G2DPlotStyleCollection(LineScatterPlotStyleKind.Line, activeLayer.GetPropertyContext()));
((XYPlotLayer)activeLayer).PlotItems.Add(functItem);
}
}
public XYFunctionPlotItem(XYFunctionPlotItem from)
{
CopyFrom((PlotItem)from);
}
public static string Fit(Altaxo.Gui.Graph.Gdi.Viewing.IGraphController ctrl, int order, double fitCurveXmin, double fitCurveXmax, bool showFormulaOnGraph)
{
string error;
double[] xarr, yarr;
error = GetActivePlotPoints(ctrl, out xarr, out yarr);
int numberOfDataPoints = xarr.Length;
if (null != error)
return error;
string[] plotNames = GetActivePlotName(ctrl);
int numberOfParameter = order + 1;
double[] parameter = new double[numberOfParameter];
LinearFitBySvd fit =
new LinearFitBySvd(
xarr, yarr, null, numberOfDataPoints, order + 1, new FunctionBaseEvaluator(EvaluatePolynomialBase), 1E-5);
// Output of results
Current.Console.WriteLine("");
Current.Console.WriteLine("---- " + DateTime.Now.ToString() + " -----------------------");
Current.Console.WriteLine("Polynomial regression of order {0} of {1} over {2}", order, plotNames[1], plotNames[0]);
Current.Console.WriteLine(
"Name Value Error F-Value Prob>F");
for (int i = 0; i < fit.Parameter.Length; i++)
Current.Console.WriteLine("A{0,-3} {1,20} {2,20} {3,20} {4,20}",
i,
fit.Parameter[i],
fit.StandardErrorOfParameter(i),
fit.TofParameter(i),
1 - FDistribution.CDF(fit.TofParameter(i), numberOfParameter, numberOfDataPoints - 1)
);
Current.Console.WriteLine("R²: {0}, Adjusted R²: {1}",
fit.RSquared,
fit.AdjustedRSquared);
Current.Console.WriteLine("------------------------------------------------------------");
Current.Console.WriteLine("Source of Degrees of");
Current.Console.WriteLine("variation freedom Sum of Squares Mean Square F0 P value");
double regressionmeansquare = fit.RegressionCorrectedSumOfSquares / numberOfParameter;
double residualmeansquare = fit.ResidualSumOfSquares / (numberOfDataPoints - numberOfParameter - 1);
Current.Console.WriteLine("Regression {0,10} {1,20} {2,20} {3,20} {4,20}",
numberOfParameter,
fit.RegressionCorrectedSumOfSquares,
fit.RegressionCorrectedSumOfSquares / numberOfParameter,
regressionmeansquare / residualmeansquare,
1 - FDistribution.CDF(regressionmeansquare / residualmeansquare, numberOfParameter, numberOfDataPoints - 1)
);
Current.Console.WriteLine("Residual {0,10} {1,20} {2,20}",
numberOfDataPoints - 1 - numberOfParameter,
fit.ResidualSumOfSquares,
residualmeansquare
);
Current.Console.WriteLine("Total {0,10} {1,20}",
numberOfDataPoints - 1,
fit.TotalCorrectedSumOfSquares
);
Current.Console.WriteLine("------------------------------------------------------------");
// add the fit curve to the graph
IScalarFunctionDD plotfunction = new PolynomialFunction(fit.Parameter);
XYFunctionPlotItem fittedCurve = new XYFunctionPlotItem(new XYFunctionPlotData(plotfunction), new G2DPlotStyleCollection(LineScatterPlotStyleKind.Line, ctrl.Doc.GetPropertyContext()));
var xylayer = ctrl.ActiveLayer as XYPlotLayer;
if (null != xylayer)
xylayer.PlotItems.Add(fittedCurve);
return null;
}