public RawReader(string argFullPath, enumRawDataType argFileType)
{
//ListenServr.StartNamedPipeServer();
Thread PipeServer = new Thread(StartNamedPipeServer);
PipeServer.Start();
_fullFilePath = argFullPath;
_fileType = argFileType;
GlypIDReader = new Process();
//GlypIDReader.OutputDataReceived += new DataReceivedEventHandler(
//(s, e) =>
//{
// Desc += e.Data + "\n";
//}
//);
startInfo = new ProcessStartInfo();
startInfo.FileName = System.IO.Path.GetDirectoryName(System.Reflection.Assembly.GetEntryAssembly().Location) + "\\GlypIDWrapper.exe";
startInfo.RedirectStandardOutput = true;
startInfo.RedirectStandardInput = true;
startInfo.RedirectStandardError = true;
startInfo.UseShellExecute = false;
startInfo.CreateNoWindow = true;
GlypIDReader.StartInfo = startInfo;
GlypIDReader.Start();
}
/// <summary>
///
/// </summary>
/// <param name="argFullPath"></param>
/// <param name="argFileType">raw or mzxml</param>
public RawReader(string argFullPath, string argFileType)
{
//ListenServr.StartNamedPipeServer();
Thread PipeServer = new Thread(StartNamedPipeServer);
PipeServer.Start();
_fullFilePath = argFullPath;
if (argFileType.ToLower() == "raw")
{
_fileType = enumRawDataType.raw;
}
else
{
_fileType = enumRawDataType.mzxml;
}
GlypIDReader = new Process();
//GlypIDReader.OutputDataReceived += new DataReceivedEventHandler(
//(s, e) =>
//{
// Desc += e.Data + "\n";
//}
//);
startInfo = new ProcessStartInfo();
startInfo.FileName = System.IO.Path.GetDirectoryName(System.Reflection.Assembly.GetEntryAssembly().Location) + "\\GlypIDWrapper.exe";
startInfo.RedirectStandardOutput = true;
startInfo.RedirectStandardInput = true;
startInfo.RedirectStandardError = true;
startInfo.UseShellExecute = false;
startInfo.CreateNoWindow = true;
GlypIDReader.StartInfo = startInfo;
GlypIDReader.Start();
}
public RawReader(string argFullPath, enumRawDataType argFileType, double argSingleToNoise, double argPeakBackground, double argPeptideBackground, short argMaxCharge)
{
Thread PipeServer = new Thread(StartNamedPipeServer);
PipeServer.Start();
_fullFilePath = argFullPath;
_fileType = argFileType;
_singleToNoiseRatio = argSingleToNoise;
_peakBackgroundRatio = argPeakBackground;
_peptideMinBackgroundRatio = argPeptideBackground;
_maxCharge = argMaxCharge;
GlypIDReader = new Process();
//GlypIDReader.OutputDataReceived += new DataReceivedEventHandler(
// (s, e) =>
// {
// Desc += e.Data + "\n";
// }
//);
startInfo = new ProcessStartInfo();
startInfo.FileName = System.IO.Path.GetDirectoryName(System.Reflection.Assembly.GetEntryAssembly().Location) + "\\GlypIDWrapper.exe";
startInfo.RedirectStandardOutput = true;
startInfo.RedirectStandardError = true;
startInfo.UseShellExecute = false;
startInfo.CreateNoWindow = true;
//PipeServerThread = new Thread(StartNamePipeServer);
//PipeServerThread.Start();
//PipeServerThread.Join();
}
/// <summary>
///
/// </summary>
/// <param name="argFullPath"></param>
/// <param name="argFileType"></param>
public RawReader(string argFullPath, enumRawDataType argRawType)
{
_fullFilePath = argFullPath;
if (argRawType == enumRawDataType.raw)
{
_fileType = "raw";
Raw = new GlypID.Readers.clsRawData(_fullFilePath, GlypID.Readers.FileType.FINNIGAN);
}
else
{
_fileType = "mzxml";
Raw = new GlypID.Readers.clsRawData(_fullFilePath, GlypID.Readers.FileType.MZXMLRAWDATA);
}
}
/// <summary>
///
/// </summary>
/// <param name="argFullPath"></param>
/// <param name="argFileType"></param>
public RawReader(string argFullPath, enumRawDataType argRawType)
{
_fullFilePath = argFullPath;
if (argRawType == enumRawDataType.raw)
{
_fileType = "raw";
Raw = new GlypID.Readers.clsRawData(_fullFilePath, GlypID.Readers.FileType.FINNIGAN);
}
else
{
_fileType = "mzxml";
Raw = new GlypID.Readers.clsRawData(_fullFilePath, GlypID.Readers.FileType.MZXMLRAWDATA);
}
}
public RawReader(string argFullPath, enumRawDataType argRawType, double argSingleToNoise, double argPeakBackground, double argPeptideBackground, short argMaxCharge)
{
_fullFilePath = argFullPath;
_singleToNoiseRatio = argSingleToNoise;
_peakBackgroundRatio = argPeakBackground;
_peptideMinBackgroundRatio = argPeptideBackground;
_maxCharge = argMaxCharge;
if (argRawType == enumRawDataType.raw)
{
_fileType = "raw";
Raw = new GlypID.Readers.clsRawData(_fullFilePath, GlypID.Readers.FileType.FINNIGAN);
}
else
{
_fileType = "mzxml";
Raw = new GlypID.Readers.clsRawData(_fullFilePath, GlypID.Readers.FileType.MZXMLRAWDATA);
}
}
public RawReader(string argFullPath, enumRawDataType argRawType, double argSingleToNoise, double argPeakBackground, double argPeptideBackground, short argMaxCharge)
{
_fullFilePath = argFullPath;
_singleToNoiseRatio = argSingleToNoise;
_peakBackgroundRatio = argPeakBackground;
_peptideMinBackgroundRatio = argPeptideBackground;
_maxCharge = argMaxCharge;
if (argRawType == enumRawDataType.raw)
{
_fileType = "raw";
Raw = new GlypID.Readers.clsRawData(_fullFilePath, GlypID.Readers.FileType.FINNIGAN);
}
else
{
_fileType = "mzxml";
Raw = new GlypID.Readers.clsRawData(_fullFilePath, GlypID.Readers.FileType.MZXMLRAWDATA);
}
}
public RawReader(string argFullPath, enumRawDataType argFileType, double argSingleToNoise, double argPeakBackground, double argPeptideBackground, short argMaxCharge)
{
Thread PipeServer = new Thread(StartNamedPipeServer);
PipeServer.Start();
_fullFilePath = argFullPath;
_fileType = argFileType;
_singleToNoiseRatio = argSingleToNoise;
_peakBackgroundRatio = argPeakBackground;
_peptideMinBackgroundRatio = argPeptideBackground;
_maxCharge = argMaxCharge;
GlypIDReader = new Process();
//GlypIDReader.OutputDataReceived += new DataReceivedEventHandler(
// (s, e) =>
// {
// Desc += e.Data + "\n";
// }
//);
startInfo = new ProcessStartInfo();
startInfo.FileName = System.IO.Path.GetDirectoryName(System.Reflection.Assembly.GetEntryAssembly().Location) + "\\GlypIDWrapper.exe";
startInfo.RedirectStandardOutput = true;
startInfo.RedirectStandardError = true;
startInfo.UseShellExecute = false;
startInfo.CreateNoWindow = true;
//PipeServerThread = new Thread(StartNamePipeServer);
//PipeServerThread.Start();
//PipeServerThread.Join();
}
