public override void OrderInitialTests(AccessionOrder accessionOrder, YellowstonePathology.Business.Interface.IOrderTarget orderTarget)
{
YellowstonePathology.Business.Test.HER2AmplificationByISH.HER2AmplificationByISHTest her2AmplificationByISHTest = new YellowstonePathology.Business.Test.HER2AmplificationByISH.HER2AmplificationByISHTest();
YellowstonePathology.Business.Test.TestOrderInfo testOrderInfo = new TestOrderInfo(her2AmplificationByISHTest, orderTarget, true);
YellowstonePathology.Business.Visitor.OrderTestOrderVisitor orderTestOrderVisitor = new Visitor.OrderTestOrderVisitor(testOrderInfo);
accessionOrder.TakeATrip(orderTestOrderVisitor);
bool hasSurgical = accessionOrder.PanelSetOrderCollection.Exists(13);
if (hasSurgical == true)
{
string surgicalReportNo = accessionOrder.PanelSetOrderCollection.GetSurgical().ReportNo;
YellowstonePathology.Business.Test.AliquotOrder aliquotOrder = (YellowstonePathology.Business.Test.AliquotOrder)orderTarget;
YellowstonePathology.Business.Test.Model.EstrogenReceptorSemiquant er = new YellowstonePathology.Business.Test.Model.EstrogenReceptorSemiquant();
YellowstonePathology.Business.Visitor.OrderTestVisitor orderERTestVisitor = new Visitor.OrderTestVisitor(surgicalReportNo, er, er.OrderComment, null, false, aliquotOrder, false, false, accessionOrder.TaskOrderCollection);
accessionOrder.TakeATrip(orderERTestVisitor);
YellowstonePathology.Business.Test.Model.ProgesteroneReceptorSemiquant pr = new YellowstonePathology.Business.Test.Model.ProgesteroneReceptorSemiquant();
YellowstonePathology.Business.Visitor.OrderTestVisitor orderPRTestVisitor = new Visitor.OrderTestVisitor(surgicalReportNo, pr, pr.OrderComment, null, false, aliquotOrder, false, false, accessionOrder.TaskOrderCollection);
accessionOrder.TakeATrip(orderPRTestVisitor);
}
else
{
YellowstonePathology.Business.Test.ErPrSemiQuantitative.ErPrSemiQuantitativeTest erPrSemiQuantitativeTest = new YellowstonePathology.Business.Test.ErPrSemiQuantitative.ErPrSemiQuantitativeTest();
YellowstonePathology.Business.Test.TestOrderInfo testOrderInfoERPR = new TestOrderInfo(erPrSemiQuantitativeTest, orderTarget, true);
YellowstonePathology.Business.Visitor.OrderTestOrderVisitor orderTestOrderVisitorERPR = new Visitor.OrderTestOrderVisitor(testOrderInfoERPR);
accessionOrder.TakeATrip(orderTestOrderVisitorERPR);
}
}
public PanelSetOrderMultipleMyelomaIgHComplexByFish(string masterAccessionNo, string reportNo, string objectId,
YellowstonePathology.Business.PanelSet.Model.PanelSet panelSet,
YellowstonePathology.Business.Interface.IOrderTarget orderTarget,
bool distribute)
: base(masterAccessionNo, reportNo, objectId, panelSet, orderTarget, distribute)
{
}
public MTDohResultView(string reportNo, YellowstonePathology.Business.Test.AccessionOrder accessionOrder)
{
this.m_AccessionOrder = accessionOrder;
this.m_PanelSetOrder = this.m_AccessionOrder.PanelSetOrderCollection.GetPanelSetOrder(reportNo);
this.m_OrderingPhysician = YellowstonePathology.Business.Gateway.PhysicianClientGateway.GetPhysicianByPhysicianId(this.m_AccessionOrder.PhysicianId);
}
public virtual void AcceptResults(YellowstonePathology.Business.Test.HPV1618.PanelSetOrderHPV1618 panelSetOrder,
YellowstonePathology.Business.User.SystemIdentity systemIdentity)
{
YellowstonePathology.Business.Test.PanelOrder panelOrder = panelSetOrder.PanelOrderCollection.GetUnacceptedPanelOrder();
panelOrder.AcceptResults();
panelSetOrder.Accept();
}
public ErPrSemiQuantitativeTestOrder(string masterAccessionNo, string reportNo, string objectId,
YellowstonePathology.Business.PanelSet.Model.PanelSet panelSet,
YellowstonePathology.Business.Interface.IOrderTarget orderTarget,
bool distribute)
: base(masterAccessionNo, reportNo, objectId, panelSet, orderTarget, distribute)
{
}
public override void SetState(YellowstonePathology.Business.Test.AccessionOrder accessionOrder)
{
base.SetState(accessionOrder);
YellowstonePathology.Business.Test.KRASStandardReflex.KRASStandardReflexTest krasStandardReflexTest = new YellowstonePathology.Business.Test.KRASStandardReflex.KRASStandardReflexTest();
this.m_BRAFV600EKTest = new YellowstonePathology.Business.Test.BRAFV600EK.BRAFV600EKTest();
if (this.m_AccessionOrder.PanelSetOrderCollection.Exists(this.m_BRAFV600EKTest.PanelSetId) == true) // || this.m_AccessionOrder.PanelSetOrderCollection.Exists(krasStandardReflexTest.PanelSetId) == true)
{
this.m_HasPanelSetBeenOrdered = true;
YellowstonePathology.Business.Test.BRAFV600EK.BRAFV600EKTestOrder panelSetOrderBraf = (YellowstonePathology.Business.Test.BRAFV600EK.BRAFV600EKTestOrder)this.m_AccessionOrder.PanelSetOrderCollection.GetBrafPanelSetOrder();
if (panelSetOrderBraf.Final == true)
{
this.m_IsStepComplete = true;
if (panelSetOrderBraf.Result == YellowstonePathology.Business.Test.BRAFV600EK.BRAFResult.Detected)
{
this.m_Stop = true;
this.m_IsStepComplete = true;
}
else if (panelSetOrderBraf.Result == YellowstonePathology.Business.Test.BRAFV600EK.BRAFResult.NotDetected)
{
this.m_NextStep = new LynchMLH1ByPCRStep();
}
}
}
}
public KRASStandardReflexKRASWithBRAFResult(string reportNo, YellowstonePathology.Business.Test.AccessionOrder accessionOrder)
: base(reportNo, accessionOrder)
{
this.m_Method = "DNA was isolated from cells or microdissection-enriched FFPE tissue. Tumor in FFPE must be present in at least 20% of the tissue. " +
"Mutations were evaluated for entire KRAS exons 2 and 3 high-sensitivity Sanger sequencing which improves the lower detection limit in mutation hotspot " +
"regions to approximately 1% abnormal DNA. This includes codons 12, 13, 14, and 61. Mutation detection outside these hotspot regions has a typical lower " +
"detection limit of 10-15% mutated KRAS in a wild-type background. The patient’s sequence is compared to the GenBank database: AF493917. The DNA was also " +
"evaluated for the presence of BRAF V600E/K by PCR and fragment size anaylsis. Various factors including quantity and quality of nucleic acid, sample " +
"preparation and sample age can affect assay performance.";
YellowstonePathology.Business.Test.BRAFV600EK.BRAFV600EKTest brafV600EKTest = new BRAFV600EK.BRAFV600EKTest();
this.m_BRAFV600EKTestOrder = (YellowstonePathology.Business.Test.BRAFV600EK.BRAFV600EKTestOrder)accessionOrder.PanelSetOrderCollection.GetPanelSetOrder(brafV600EKTest.PanelSetId, this.m_KRASStandardReflexTestOrder.OrderedOnId, true);
if (this.KRASStandardTestOrder.Final == true)
{
this.m_KRASStandardResult = this.m_KRASStandardTestOrder.Result;
}
else
{
this.m_KRASStandardResult = KRASStandardReflexResult.PendingResult;
}
if (this.m_BRAFV600EKTestOrder.Final == true)
{
this.m_BRAFV600EKResult = this.m_BRAFV600EKTestOrder.Result;
}
else
{
this.m_BRAFV600EKResult = KRASStandardReflexResult.PendingResult;
}
}
public NeoARRAYSNPCytogeneticProfileTestOrder(string masterAccessionNo, string reportNo, string objectId,
YellowstonePathology.Business.PanelSet.Model.PanelSet panelSet,
YellowstonePathology.Business.Interface.IOrderTarget orderTarget,
bool distribute)
: base(masterAccessionNo, reportNo, objectId, panelSet, orderTarget, distribute)
{
}
public override void AcceptResults(YellowstonePathology.Business.Rules.RuleExecutionStatus ruleExecutionStatus, YellowstonePathology.Business.Test.AccessionOrder accessionOrder, Business.User.SystemUser acceptingUser)
{
YellowstonePathology.Business.Rules.ExecutionStatus executionStatus = new YellowstonePathology.Business.Rules.ExecutionStatus();
YellowstonePathology.Business.Test.PanelSetOrder panelSetOrder = accessionOrder.PanelSetOrderCollection.GetPanelSetOrder(this.ReportNo);
if (panelSetOrder.Final == true)
{
executionStatus.AddMessage(this.ReportNo + " is already finaled.", true);
ruleExecutionStatus.PopulateFromLinqExecutionStatus(executionStatus);
return;
}
if (this.Accepted == true)
{
executionStatus.AddMessage(this.ReportNo + " Acid Wash result has already been accepted.", true);
ruleExecutionStatus.PopulateFromLinqExecutionStatus(executionStatus);
return;
}
this.Accepted = true;
this.AcceptedById = acceptingUser.UserId;
this.AcceptedDate = DateTime.Today;
this.AcceptedTime = DateTime.Now;
this.Acknowledged = true;
this.AcknowledgedById = acceptingUser.UserId;
this.AcknowledgedDate = DateTime.Today;
this.AcknowledgedTime = DateTime.Now;
}
public RUNX1RUNX1T1AML1ETOTranslocationTestOrder(string masterAccessionNo, string reportNo, string objectId,
YellowstonePathology.Business.PanelSet.Model.PanelSet panelSet,
YellowstonePathology.Business.Interface.IOrderTarget orderTarget,
bool distribute)
: base(masterAccessionNo, reportNo, objectId, panelSet, orderTarget, distribute)
{
}
public CalreticulinMutationAnalysisResultPage(YellowstonePathology.Business.Test.CalreticulinMutationAnalysis.CalreticulinMutationAnalysisTestOrder testOrder,
YellowstonePathology.Business.Test.AccessionOrder accessionOrder,
YellowstonePathology.Business.User.SystemIdentity systemIdentity)
: base(testOrder, accessionOrder)
{
this.m_PanelSetOrder = testOrder;
this.m_AccessionOrder = accessionOrder;
this.m_SystemIdentity = systemIdentity;
this.m_PageHeaderText = "Calreticulin Mutation Analysis Results For: " + this.m_AccessionOrder.PatientDisplayName;
YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimenOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrderByOrderTarget(this.m_PanelSetOrder.OrderedOnId);
YellowstonePathology.Business.Test.AliquotOrder aliquotOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetAliquotOrder(this.m_PanelSetOrder.OrderedOnId);
this.m_OrderedOnDescription = specimenOrder.Description;
if(aliquotOrder != null) this.m_OrderedOnDescription += ": " + aliquotOrder.Label;
this.m_CalreticulinMutationAnalysisResultCollection = new YellowstonePathology.Business.Test.CalreticulinMutationAnalysis.CalreticulinMutationAnalysisResultCollection();
InitializeComponent();
DataContext = this;
this.m_ControlsNotDisabledOnFinal.Add(this.ButtonNext);
this.m_ControlsNotDisabledOnFinal.Add(this.TextBlockShowDocument);
this.m_ControlsNotDisabledOnFinal.Add(this.TextBlockUnfinalResults);
}
public MPNStandardReflexPage(YellowstonePathology.Business.Test.MPNStandardReflex.PanelSetOrderMPNStandardReflex testOrder,
YellowstonePathology.Business.Test.AccessionOrder accessionOrder,
YellowstonePathology.Business.User.SystemIdentity systemIdentity)
: base(testOrder, accessionOrder)
{
this.m_AccessionOrder = accessionOrder;
this.m_SystemIdentity = systemIdentity;
YellowstonePathology.Business.Test.MPNStandardReflex.MPNStandardReflexTest panelSetMPNStandardReflex = new YellowstonePathology.Business.Test.MPNStandardReflex.MPNStandardReflexTest();
YellowstonePathology.Business.Test.JAK2V617F.JAK2V617FTest panelSetJAK2V617F = new YellowstonePathology.Business.Test.JAK2V617F.JAK2V617FTest();
YellowstonePathology.Business.Test.JAK2Exon1214.JAK2Exon1214Test panelSetJAK2Exon1214 = new YellowstonePathology.Business.Test.JAK2Exon1214.JAK2Exon1214Test();
this.m_PanelSetOrderMPNStandardReflex = (YellowstonePathology.Business.Test.MPNStandardReflex.PanelSetOrderMPNStandardReflex)this.m_AccessionOrder.PanelSetOrderCollection.GetPanelSetOrder(panelSetMPNStandardReflex.PanelSetId);
this.m_PanelSetOrderJAK2V617F = (YellowstonePathology.Business.Test.JAK2V617F.JAK2V617FTestOrder)this.m_AccessionOrder.PanelSetOrderCollection.GetPanelSetOrder(panelSetJAK2V617F.PanelSetId);
this.m_JAK2V617FResult = this.m_PanelSetOrderJAK2V617F.Result;
this.m_PanelSetOrderJAK2Exon1214 = (YellowstonePathology.Business.Test.JAK2Exon1214.JAK2Exon1214TestOrder)this.m_AccessionOrder.PanelSetOrderCollection.GetPanelSetOrder(panelSetJAK2Exon1214.PanelSetId);
this.m_SpecimenOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrderByOrderTarget(this.m_PanelSetOrderMPNStandardReflex.OrderedOnId);
this.m_PageHeaderText = this.m_PanelSetOrderMPNStandardReflex.PanelSetName + " for: " + this.m_AccessionOrder.PatientDisplayName;
InitializeComponent();
this.DataContext = this;
this.m_ControlsNotDisabledOnFinal.Add(this.ButtonBack);
this.m_ControlsNotDisabledOnFinal.Add(this.ButtonFinish);
this.m_ControlsNotDisabledOnFinal.Add(this.TextBlockShowDocument);
this.m_ControlsNotDisabledOnFinal.Add(this.TextBlockUnfinalResults);
}
public BlockLabelPrinter(YellowstonePathology.Business.Test.AliquotOrderCollection aliquotOrderCollection, YellowstonePathology.Business.Test.AccessionOrder accessionOrder)
{
this.m_BlockLabelQueue = new Queue<Business.Label.Model.HistologyBlockPaperZPLLabel>();
foreach (YellowstonePathology.Business.Test.AliquotOrder aliquotOrder in aliquotOrderCollection)
{
if (aliquotOrder.IsBlock() == true)
{
if (aliquotOrder.LabelType == YellowstonePathology.Business.Specimen.Model.AliquotLabelType.PaperLabel == true)
{
YellowstonePathology.Business.OrderIdParser orderIdParser = new OrderIdParser(accessionOrder.MasterAccessionNo);
if (orderIdParser.IsLegacyMasterAccessionNo == false)
{
string initials = Business.Helper.PatientHelper.GetPatientInitials(accessionOrder.PFirstName, accessionOrder.PLastName);
Business.Label.Model.HistologyBlockPaperZPLLabel blockLabel = new Business.Label.Model.HistologyBlockPaperZPLLabel(aliquotOrder.AliquotOrderId, accessionOrder.PLastName, accessionOrder.PFirstName, aliquotOrder.Label, accessionOrder.MasterAccessionNo);
this.m_BlockLabelQueue.Enqueue(blockLabel);
aliquotOrder.Printed = true;
}
else
{
string reportNo = accessionOrder.PanelSetOrderCollection[0].ReportNo;
string initials = Business.Helper.PatientHelper.GetPatientInitials(accessionOrder.PFirstName, accessionOrder.PLastName);
Business.Label.Model.HistologyBlockPaperZPLLabel blockLabel = new Business.Label.Model.HistologyBlockPaperZPLLabel(aliquotOrder.AliquotOrderId, accessionOrder.PFirstName, accessionOrder.PLastName, aliquotOrder.Label, reportNo);
this.m_BlockLabelQueue.Enqueue(blockLabel);
aliquotOrder.Printed = true;
}
}
}
}
}
public CuttingPage(YellowstonePathology.Business.Test.AliquotOrder aliquotOrder,
YellowstonePathology.Business.Test.Model.TestOrder testOrder,
YellowstonePathology.Business.Test.AccessionOrder accessionOrder,
YellowstonePathology.Business.Label.Model.HistologySlidePaperLabelPrinter histologySlidePaperLabelPrinter,
YellowstonePathology.UI.Navigation.PageNavigator pageNavigator)
{
this.m_AliquotOrder = aliquotOrder;
this.m_AccessionOrder = accessionOrder;
this.m_TestOrder = testOrder;
this.m_PageNavigator = pageNavigator;
this.m_HistologySlidePaperLabelPrinter = histologySlidePaperLabelPrinter;
this.m_SpecimenOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrderByAliquotOrderId(this.m_AliquotOrder.AliquotOrderId);
this.m_PanelSetOrder = this.m_AccessionOrder.PanelSetOrderCollection.GetPanelSetOrderByTestOrderId(this.m_TestOrder.TestOrderId);
this.m_PanelOrder = this.m_AccessionOrder.PanelSetOrderCollection.GetPanelOrderByTestOrderId(this.m_TestOrder.TestOrderId);
this.m_SystemIdentity = Business.User.SystemIdentity.Instance;
this.m_ListBoxSlidesMouseDownTimer = new System.Windows.Threading.DispatcherTimer();
this.m_ListBoxSlidesMouseDownTimer.Interval = new TimeSpan(0, 0, 0, 0, 750);
this.m_ListBoxSlidesMouseDownTimer.Tick += new EventHandler(ListBoxSlidesMouseDownTimer_Tick);
this.m_BarcodeScanPort = YellowstonePathology.Business.BarcodeScanning.BarcodeScanPort.Instance;
InitializeComponent();
DataContext = this;
this.m_PageTimeoutTimer = new System.Windows.Threading.DispatcherTimer();
this.m_PageTimeoutTimer.Interval = TimeSpan.FromMinutes(15);
this.m_PageTimeoutTimer.Tick += new EventHandler(PageTimeoutTimer_Tick);
this.m_PageTimeoutTimer.Start();
this.Loaded += new RoutedEventHandler(CuttingPage_Loaded);
this.Unloaded += new RoutedEventHandler(CuttingPage_Unloaded);
}
public KRASStandardReflexTestOrder(string masterAccessionNo, string reportNo, string objectId,
YellowstonePathology.Business.PanelSet.Model.PanelSet panelSet,
YellowstonePathology.Business.Interface.IOrderTarget orderTarget,
bool distribute)
: base(masterAccessionNo, reportNo, objectId, panelSet, orderTarget, distribute)
{
}
public void Execute(string masterAccessionNo, int assignToId, YellowstonePathology.Business.Rules.ExecutionStatus executionStatus)
{
this.m_MasterAccessionNo = masterAccessionNo;
this.m_AssignedToId = assignToId;
this.m_ExecutionStatus = executionStatus;
this.m_Rule.Execute(executionStatus);
}
public TrichomonasResultPath(string reportNo, YellowstonePathology.Business.Test.AccessionOrder accessionOrder,
YellowstonePathology.UI.Navigation.PageNavigator pageNavigator, System.Windows.Window window)
: base(pageNavigator, window)
{
this.m_AccessionOrder = accessionOrder;
this.m_TestOrder = (YellowstonePathology.Business.Test.Trichomonas.TrichomonasTestOrder)this.m_AccessionOrder.PanelSetOrderCollection.GetPanelSetOrder(reportNo);
}
public ResultControl(YellowstonePathology.Business.Test.PanelSetOrder testOrder,
YellowstonePathology.Business.Test.AccessionOrder accessionOrder)
{
this.m_TestOrder = testOrder;
this.m_ControlsNotDisabledOnFinal = new List<FrameworkElement>();
this.m_DisableRequired = false;
if (accessionOrder.AccessionLock.IsLockAquiredByMe == false)
{
this.m_DisableRequired = true;
}
else if(this.m_TestOrder.Final == true)
{
if(this.m_TestOrder.Distribute == false)
{
this.m_DisableRequired = true;
}
else if(this.m_TestOrder.TestOrderReportDistributionCollection.HasDistributedItems())
{
this.m_DisableRequired = true;
}
}
this.Loaded += ResultControl_Loaded;
}
public ImmediateExamCorrelationDialog(YellowstonePathology.Business.Test.Surgical.IntraoperativeConsultationResult intraoperativeConsultationResult)
{
this.m_IntraoperativeConsultationResult = intraoperativeConsultationResult;
this.m_CorrelationTypes = new List<string>();
this.m_CorrelationTypes.Add("Not correlated");
this.m_CorrelationTypes.Add("Agree");
this.m_CorrelationTypes.Add("Defer");
this.m_CorrelationTypes.Add("Not applicable");
this.m_CorrelationTypes.Add("Disagree");
this.m_DescrepancyTypes = new List<string>();
this.m_DescrepancyTypes.Add("Gross exam/microscopic exam discrepancy");
this.m_DescrepancyTypes.Add("Misinterpretation");
this.m_DescrepancyTypes.Add("Specimen sampling");
this.m_DescrepancyTypes.Add("Tissue block sampling");
this.m_DescrepancyTypes.Add("Technical (sectioning) inadequacy");
this.m_DescrepancyTypes.Add("Inadequate clinical information");
this.m_DescrepancyTypes.Add("Labeling error");
this.m_patientCareEffects = new List<string>();
this.m_patientCareEffects.Add("No impact on patient care");
this.m_patientCareEffects.Add("Minor or questionable impact on patient care");
this.m_patientCareEffects.Add("Major or potentially major impact on patient care");
InitializeComponent();
DataContext = this;
}
public PSABillingDocument(YellowstonePathology.Business.Test.AccessionOrder accessionOrder, string reportNo)
: base("Case")
{
this.m_AccessionOrder = accessionOrder;
this.m_ReportNo = reportNo;
this.m_PanelSetOrder = this.m_AccessionOrder.PanelSetOrderCollection.GetPanelSetOrder(this.m_ReportNo);
}
public PDL122C3TestOrder(string masterAccessionNo, string reportNo, string objectId,
YellowstonePathology.Business.PanelSet.Model.PanelSet panelSet,
YellowstonePathology.Business.Interface.IOrderTarget orderTarget,
bool distribute)
: base(masterAccessionNo, reportNo, objectId, panelSet, orderTarget, distribute)
{
this.m_Method = "PD-L1 22C3 FDA (KEYTRUDA): " +
"PD - L1 staining was performed utilizing the DAKO FDA - approved PD - L1, 22C3 pharmDx protocol using the Dako Automated Link 48 platform.Following incubation " +
"with the primary monoclonal antibody to PD - L1 or the Negative Control Reagent(NCR), specimens were incubated with a Linker antibody specific to the host species " +
"of the primary antibody, and then were incubated with a ready-to - use visualization reagent consisting of secondary antibody molecules and horseradish peroxidase " +
"molecules coupled to a dextran polymer backbone.The enzymatic conversion of the subsequently added chromogen results in precipitation of a visible reaction product at " +
"the site of antigen.The color of the chromogenic reaction was modified by a chromogen enhancement reagent.The specimen then was counterstained and coverslipped.PD - L1 " +
"protein expression is determined by using Tumor Proportion Score(TPS), which is the percentage of viable tumor cells showing partial or complete membrane staining. The specimen " +
"should be considered PD-L1 positive for KEYTRUDA (pembrolizumab) eligibility if TPS >= 50% of the viable tumor cells exhibit membrane staining at any intensity.";
this.m_Interpretation = "PD-L1 is one of the receptors for PD-1. PD-L1 is inducibly expressed on both hematopoietic and " +
"non-hematopoietic cells following cellspecific stimulation and plays a role in maintenance of peripheral tolerance. PD - L1 " +
"expression has been linked to poorer prognosis and shorter survival in some tumor types. On - going clinical trials are " +
"evaluating the efficacy of inhibition of PD - L1 in various tumors.";
this.m_ReportReferences = "1. Ohaegbulam KC, Assal A, Lazar-Molnar E, et al. Human cancer immunotherapy with antibodies to the PD-1 and " +
"PD-L1 pathway. Trends Mol Med. 2015; 21(1):24 - 33." + Environment.NewLine +
"2. D'Incecco A, Andreozzi M, et al.PD - 1 and PD - L1 expression in molecularly selected non - small - cell lung cancer " +
"patients.Br J Cancer. 2015; 112(1):95 - 102." + Environment.NewLine +
"3. Massi D, Brusa D, Merelli B, et al. PD - L1 marks a subset of melanomas with a shorter overall survival and distinct genetic " +
"and morphological characteristics. Ann Oncol. 2014; 25(12):2433 - 42." + Environment.NewLine +
"4. Chen BJ, Chapuy B, Ouyang J, et al. PD - L1 expression is characteristic of a subset of aggressive B-cell lymphomas and " +
"virusassociated malignancies.Clin Cancer Res. 2013; 19(13):3462 - 73." + Environment.NewLine +
"5. Zhang Y, Kang S, Shen J, et al. Prognostic significance of programmed cell death 1(PD - 1) or PD-1 ligand 1(PD - L1) Expression " +
"in epithelial - originated cancer: a meta-analysis.Medicine(Baltimore). 2015; 94(6):e515.";
this.m_Comment = "This test utilizes PD-L1 antibody clone 22C3. In general, higher levels of PD-L1 expression are associated with " +
"better response to PD-1 antagonists.";
}
public PeerReview(YellowstonePathology.Business.Test.AccessionOrder accessonOrderItem)
{
this.m_PanelOrderItems = new List<YellowstonePathology.Business.Test.PanelOrder>();
this.m_AccessionOrder = accessonOrderItem;
InitializeComponent();
this.DataContext = this;
}
public ContainerMatchingPage(YellowstonePathology.UI.Navigation.PageNavigator pageNavigator,
YellowstonePathology.Business.ClientOrder.Model.ClientOrderDetail clientOrderDetail)
{
this.m_PageNavigator = pageNavigator;
this.m_FixationTypeCollection = YellowstonePathology.Business.Specimen.Model.FixationType.GetFixationTypeCollection();
if (string.IsNullOrEmpty(clientOrderDetail.SpecimenNumberMatchStatus) == true)
{
clientOrderDetail.SpecimenNumberMatchStatus = "Not Determined";
}
if (string.IsNullOrEmpty(clientOrderDetail.SpecimenDescriptionMatchStatus) == true)
{
clientOrderDetail.SpecimenDescriptionMatchStatus = "Not Determined";
}
this.m_ClientOrderMedia = new Business.ClientOrder.Model.ClientOrderMedia();
this.m_ClientOrderMedia.SpecimenNumberMatchStatus = clientOrderDetail.SpecimenNumberMatchStatus;
this.m_ClientOrderMedia.SpecimenDescriptionMatchStatus = clientOrderDetail.SpecimenDescriptionMatchStatus;
this.m_ClientOrderDetail = clientOrderDetail;
InitializeComponent();
this.DataContext = this;
}
public void Build(SqlCommand cmd, YellowstonePathology.Business.Test.AccessionOrder accessionOrder)
{
XElement document = null;
using (SqlConnection cn = new SqlConnection(YellowstonePathology.Business.Properties.Settings.Default.CurrentConnectionString))
{
cn.Open();
cmd.Connection = cn;
using (XmlReader xmlReader = cmd.ExecuteXmlReader())
{
if (xmlReader.Read() == true)
{
document = XElement.Load(xmlReader, LoadOptions.PreserveWhitespace);
}
}
}
if (document != null)
{
YellowstonePathology.Business.Persistence.XmlPropertyWriter xmlPropertyWriter = new YellowstonePathology.Business.Persistence.XmlPropertyWriter(document, accessionOrder);
xmlPropertyWriter.Write();
BuildSpecimenOrder(accessionOrder, document);
BuildTaskOrder(accessionOrder, document);
BuildIcdBillingCode(accessionOrder, document);
BuildPanelSetOrder(accessionOrder, document);
}
}
public CalreticulinMutationAnalysisTestOrder(string masterAccessionNo, string reportNo, string objectId,
YellowstonePathology.Business.PanelSet.Model.PanelSet panelSet,
YellowstonePathology.Business.Interface.IOrderTarget orderTarget,
bool distribute)
: base(masterAccessionNo, reportNo, objectId, panelSet, orderTarget, distribute)
{
}
public void SetSurgicalAuditAmendment(YellowstonePathology.Business.Test.Surgical.SurgicalTestOrder panelSetOrder)
{
foreach (YellowstonePathology.Business.Amendment.Model.Amendment amendment in panelSetOrder.AmendmentCollection)
{
panelSetOrder.SurgicalAuditCollection.SetAmendmentReference(amendment);
}
}
private void BuildClient(YellowstonePathology.Business.Client.Model.Client client)
{
using (SqlConnection cn = new SqlConnection(YellowstonePathology.Properties.Settings.Default.CurrentConnectionString))
{
cn.Open();
this.m_SQLCommand.Connection = cn;
using (SqlDataReader dr = this.m_SQLCommand.ExecuteReader(CommandBehavior.KeyInfo))
{
while (dr.Read())
{
Persistence.SqlDataReaderPropertyWriter sqlDataReaderPropertyWriter = new Persistence.SqlDataReaderPropertyWriter(client, dr);
sqlDataReaderPropertyWriter.WriteProperties();
}
if (dr.IsClosed == false)
{
dr.NextResult();
while (dr.Read())
{
YellowstonePathology.Business.Client.Model.ClientLocation clientLocation = new YellowstonePathology.Business.Client.Model.ClientLocation();
Persistence.SqlDataReaderPropertyWriter sqlDataReaderPropertyWriter = new Persistence.SqlDataReaderPropertyWriter(clientLocation, dr);
sqlDataReaderPropertyWriter.WriteProperties();
client.ClientLocationCollection.Add(clientLocation);
}
}
}
}
}
public PlasmaCellMyelomaRiskStratificationTestOrder(string masterAccessionNo, string reportNo, string objectId,
YellowstonePathology.Business.PanelSet.Model.PanelSet panelSet,
YellowstonePathology.Business.Interface.IOrderTarget orderTarget,
bool distribute)
: base(masterAccessionNo, reportNo, objectId, panelSet, orderTarget, distribute)
{
}
public LynchSyndromeEvaluationResultPage(YellowstonePathology.Business.Test.LynchSyndrome.PanelSetOrderLynchSyndromeEvaluation panelSetOrderLynchSyndromeEvaluation,
YellowstonePathology.Business.Test.AccessionOrder accessionOrder,
YellowstonePathology.Business.User.SystemIdentity systemIdentity,
System.Windows.Visibility backButtonVisibility)
: base(panelSetOrderLynchSyndromeEvaluation, accessionOrder)
{
this.m_PanelSetOrderLynchSyndromeEvaluation = panelSetOrderLynchSyndromeEvaluation;
this.m_AccessionOrder = accessionOrder;
this.m_SystemIdentity = systemIdentity;
this.m_BackButtonVisibility = backButtonVisibility;
this.m_LSETypeCollection = new Business.Test.LynchSyndrome.LSETypeCollection();
this.m_PageHeaderText = "Lynch Syndrome Evaluation Results For: " + this.m_AccessionOrder.PatientDisplayName + " (" + this.m_PanelSetOrderLynchSyndromeEvaluation.ReportNo + ")";
YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimenOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrderByOrderTarget(this.m_PanelSetOrderLynchSyndromeEvaluation.OrderedOnId);
YellowstonePathology.Business.Test.AliquotOrder aliquotOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetAliquotOrder(this.m_PanelSetOrderLynchSyndromeEvaluation.OrderedOnId);
this.m_OrderedOnDescription = specimenOrder.Description;
if (aliquotOrder != null) this.m_OrderedOnDescription += ": " + aliquotOrder.Label;
InitializeComponent();
DataContext = this;
this.Loaded += new RoutedEventHandler(LynchSyndromeEvaluationResultPage_Loaded);
this.m_ControlsNotDisabledOnFinal.Add(this.ButtonBack);
this.m_ControlsNotDisabledOnFinal.Add(this.ButtonNext);
this.m_ControlsNotDisabledOnFinal.Add(this.TextBlockShowDocument);
this.m_ControlsNotDisabledOnFinal.Add(this.TextBlockUnfinalResults);
}
public InvasiveBreastPanel(string masterAccessionNo, string reportNo, string objectId,
YellowstonePathology.Business.PanelSet.Model.PanelSet panelSet,
YellowstonePathology.Business.Interface.IOrderTarget orderTarget,
bool distribute)
: base(masterAccessionNo, reportNo, objectId, panelSet, orderTarget, distribute)
{
}
