public void ShowPreview()
{
Debug.Assert(PreviewButtonVisible);
var viewInfo = new ViewInfo(ViewInfo.ParentColumn, ViewSpec.SetName(ViewName));
ViewContext.Preview(this, viewInfo);
}
private ViewSpec GetClusteredViewSpec(ViewSpec defaultViewSpec)
{
var clusteredViewSpec = defaultViewSpec.SetName(CLUSTERED_VIEW_NAME).SetRowType(typeof(FoldChangeDetailRow));
PropertyPath ppRunAbundance = PropertyPath.Root.Property(nameof(FoldChangeDetailRow.ReplicateAbundances)).DictionaryValues();
PropertyPath ppFoldChange = PropertyPath.Root.Property(nameof(FoldChangeDetailRow.FoldChangeResults))
.DictionaryValues();
var columnsToAdd = new List <PropertyPath>();
var columnPrefixesToRemove = new List <PropertyPath>()
{
PropertyPath.Root.Property(nameof(FoldChangeRow.FoldChangeResult)),
PropertyPath.Root.Property(nameof(FoldChangeRow.Group))
};
columnsToAdd.Add(ppFoldChange);
columnsToAdd.Add(ppFoldChange.Property(nameof(FoldChangeResult.AdjustedPValue)));
if (!string.IsNullOrEmpty(GroupComparisonModel.GroupComparisonDef.IdentityAnnotation))
{
columnsToAdd.Add(ppRunAbundance.Property(nameof(ReplicateRow.ReplicateSampleIdentity)));
}
columnsToAdd.Add(ppRunAbundance.Property(nameof(ReplicateRow.ReplicateGroup)));
columnsToAdd.Add(ppRunAbundance.Property(nameof(ReplicateRow.Abundance)));
clusteredViewSpec = clusteredViewSpec.SetColumns(clusteredViewSpec.Columns
.Where(col => !columnPrefixesToRemove.Any(prefix => col.PropertyPath.StartsWith(prefix)))
.Concat(columnsToAdd.Select(col => new ColumnSpec(col))));
return(clusteredViewSpec);
}
public void TestWriteReadXml()
{
var stringBuilder = new StringBuilder();
var viewSpec = new ViewSpec();
var xmlSerializer = new XmlSerializer(typeof (ViewSpecList));
xmlSerializer.Serialize(XmlWriter.Create(stringBuilder), new ViewSpecList(new[] {viewSpec}));
var viewSpecCompare = ((ViewSpecList) xmlSerializer.Deserialize(new StringReader(stringBuilder.ToString()))).ViewSpecs[0];
Assert.AreEqual(viewSpec, viewSpecCompare);
var viewSpecEmpty = ((ViewSpecList) xmlSerializer.Deserialize(new StringReader("<views><view /></views>"))).ViewSpecs[0];
Assert.AreEqual(viewSpec, viewSpecEmpty);
viewSpec = viewSpec
.SetName("ViewName")
.SetColumns(new[] {new ColumnSpec().SetName("foo"), new ColumnSpec().SetName("bar"),});
Assert.AreNotEqual(viewSpecCompare, viewSpec);
stringBuilder.Length = 0;
xmlSerializer.Serialize(XmlWriter.Create(stringBuilder), new ViewSpecList(new[] {viewSpec}));
viewSpecCompare = ((ViewSpecList) xmlSerializer.Deserialize(new StringReader(stringBuilder.ToString()))).ViewSpecs[0];
Assert.AreEqual(viewSpec, viewSpecCompare);
}
public void TestWriteReadXml()
{
var stringBuilder = new StringBuilder();
var viewSpec = new ViewSpec();
var xmlSerializer = new XmlSerializer(typeof(ViewSpecList));
xmlSerializer.Serialize(XmlWriter.Create(stringBuilder), new ViewSpecList(new[] { viewSpec }));
var viewSpecCompare = ((ViewSpecList)xmlSerializer.Deserialize(new StringReader(stringBuilder.ToString()))).ViewSpecLayouts[0].ViewSpec;
Assert.AreEqual(viewSpec, viewSpecCompare);
var viewSpecEmpty = ((ViewSpecList)xmlSerializer.Deserialize(new StringReader("<views><view /></views>"))).ViewSpecLayouts[0].ViewSpec;
Assert.AreEqual(viewSpec, viewSpecEmpty);
viewSpec = viewSpec
.SetName("ViewName")
.SetColumns(new[] { new ColumnSpec().SetName("foo"), new ColumnSpec().SetName("bar"), });
Assert.AreNotEqual(viewSpecCompare, viewSpec);
stringBuilder.Length = 0;
xmlSerializer.Serialize(XmlWriter.Create(stringBuilder), new ViewSpecList(new[] { viewSpec }));
viewSpecCompare = ((ViewSpecList)xmlSerializer.Deserialize(new StringReader(stringBuilder.ToString()))).ViewSpecLayouts[0].ViewSpec;
Assert.AreEqual(viewSpec, viewSpecCompare);
}