private void AddAFile(string filePath)
{
string filename = Path.GetFileName(filePath);
string theExtension = Path.GetExtension(filename).ToLowerInvariant();
switch (theExtension)
{
case ".raw":
if (!ThermoStaticData.CheckForMsFileReader())
{
AddNotification("Warning! Cannot find Thermo MSFileReader (v3.0 SP2 is preferred); a crash may result from searching this .raw file");
}
goto case ".mzml";
case ".mzml":
SpectraFileForDataGrid spectraFile = new SpectraFileForDataGrid(filePath);
if (!spectraFilesForDataGrid.Select(f => f.FilePath).Contains(spectraFile.FilePath))
{
spectraFilesForDataGrid.Add(spectraFile);
}
if (string.IsNullOrEmpty(OutputFolderTextBox.Text))
{
var pathOfFirstSpectraFile = Path.GetDirectoryName(spectraFilesForDataGrid.First().FilePath);
OutputFolderTextBox.Text = Path.Combine(pathOfFirstSpectraFile, @"FlashLFQ_$DATETIME");
}
break;
case ".txt":
case ".tsv":
case ".psmtsv":
case ".tabular":
IdentificationFileForDataGrid identFile = new IdentificationFileForDataGrid(filePath);
if (!identFilesForDataGrid.Select(f => f.FilePath).Contains(identFile.FilePath) && !identFile.FileName.Equals("ExperimentalDesign.tsv"))
{
identFilesForDataGrid.Add(identFile);
}
break;
default:
AddNotification("Unrecognized file type: " + theExtension);
break;
}
}
public static void ThermoReaderNotInstalled()
{
bool check = ThermoStaticData.CheckForMsFileReader();
Assert.IsTrue(check);
}