private static ITICData DOReadTICTest1(string FileName) // data file name, such as c:\temp\mydata.d
{
IDataAccess dataAccessor = new DataAccess() as IDataAccess;
string sFileName = string.Empty;
try
{
double[] m_allRtArray = null; // RT x-value
float[] m_allTicYArray = null; // TIC y-values
sFileName = FileName;
dataAccessor.OpenDataFile(sFileName);
var m_BDADataAccess = dataAccessor.BaseDataAccess;
IBDAChromFilter psetfilter = new BDAChromFilter();
psetfilter.ChromatogramType = ChromType.TotalIon;
IBDAChromData[] chromarray = m_BDADataAccess.GetChromatogram(psetfilter);
m_allRtArray = chromarray[0].XArray;
m_allTicYArray = chromarray[0].YArray;
TICData tICData = new TICData();
tICData.SetTICData(m_allRtArray, m_allTicYArray);
return(tICData);
}
catch (Exception ex)
{
// MessageBox.Show(ex.Message);
throw;
}
finally
{
if (!string.IsNullOrEmpty(sFileName))
{
dataAccessor.CloseDataFile(); // make sure the data file will be closed
}
}
}
private void CreateGraphObjects()
{
if (Data == null)
{
return;
}
int index = 0;
foreach (string sample in Data.Keys)
{
TICData sampleData = Data[sample];
Color graphColor = colorArray[index % colorArray.Length];
GraphBaseObject graphObject = new TICGraphObject(sampleData, graphColor);
PlotControl.AddItem(index, 0, graphObject);
index++;
}
}
public static Dictionary <string, TICData> Extract(List <string> FileList)
{
Dictionary <string, TICData> result = new Dictionary <string, TICData>();
//QualFeatureConfig.InitRegistryFromAppConfig();
AppFeatureConfig.Configuration.SetKeyState(AppFeatureConfig.Key_ProfinderApp, true);
//IMsStreamsProvider msStreamsProvider = new MsStreamsLocalFsProvider(new RawDataReader(new System.IO.FileStream(args[0], System.IO.FileMode.Open)), args[0]);
foreach (string filename in FileList)
{
TICData tICData = DOReadTICTest1(filename) as TICData;
//Console.WriteLine("File Name: " + filename + "\nNo. of Data Points in TIC " + tICData.XArray.Length);
result.Add(filename, tICData);
}
return(result);
//Console.ReadKey();
}
