public GeneralAccumulatedGlycoPeptideMassProxy( SpecialGlycoPeptide <IAccumulatedGlycanMassProxy> glycoPeptide) { calculator = UtilMass.Instance; option = UtilMassOption.Instance; mass = new HashSet <double>(); this.glycoPeptide = glycoPeptide; foreach (double glycanMass in (glycoPeptide.GetGlycan() as IAccumulatedGlycanMassProxy).GetMass()) { foreach (double peptideMass in CalcPTMPeptideMass.GetNGlycanPeptideMass( GetPeptide().GetSequence(), GetPosition())) { mass.Add(glycanMass + peptideMass); } mass.Add(glycanMass + calculator.CalcPeptideMass(glycoPeptide.GetPeptide(), option)); } mass.UnionWith(CalcPTMPeptideMass.GetNonGlycanPeptideMass(GetPeptide().GetSequence(), GetPosition())); massList = mass.ToList(); massList.Sort(); }
public IGlycan GetGlycan() { return(glycoPeptide.GetGlycan()); }