public List <int> Execute(string samplesfilepath)
{
string pshcmd = String.Format("{0}\\overlap_compute.exe {1} {2}",
GConfig.TOOL_OVERLAP_COMPUTE_PATH,
Path.GetDirectoryName(samplesfilepath),
Path.GetFileName(samplesfilepath));
PowerShell.Execute(pshcmd,
false,
Path.GetDirectoryName(samplesfilepath));
string resultFileName = Path.Combine(
Path.GetDirectoryName(samplesfilepath),
resultfile_prefix + Path.GetFileName(samplesfilepath));
try
{
List <int> lst = SpaceSeparatedFileParser.ParseInt(resultFileName);
return(lst);
}
catch (Exception ex)
{
File.Delete(resultFileName);
throw ex;
}
}
public List <int> Execute(string dmrfilepath, string samplesfilepath)
{
string pshcmd = String.Format("{0}\\underground_filter.exe {1} {2} {3} {4}",
GConfig.TOOL_UNDERGROUND_FILTER_PATH,
Path.GetDirectoryName(dmrfilepath),
Path.GetFileName(dmrfilepath),
Path.GetDirectoryName(samplesfilepath),
Path.GetFileName(samplesfilepath));
PowerShell.Execute(pshcmd,
false,
Path.GetDirectoryName(samplesfilepath));
string resultFileName = Path.Combine(
Path.GetDirectoryName(samplesfilepath),
"underground" + Path.GetFileName(samplesfilepath));
try
{
List <int> lst = SpaceSeparatedFileParser.ParseInt(resultFileName);
return(lst);
}
catch (Exception ex)
{
File.Delete(resultFileName);
throw ex;
}
}
private void LoadSpaceSeparatedFile(string filename, EventHandler <RowEventArgs> processEntryDelegate)
{
if (processEntryDelegate == null)
{
throw new ArgumentNullException("processEntryDelegate");
}
using (var streamReader = new CountingStreamReader(filename, DataFileTools.OpenInputFile(filename), Encoding.UTF8))
{
fileReader = streamReader;
var reader = new SpaceSeparatedFileParser(streamReader);
reader.RowComplete += processEntryDelegate;
reader.Parse();
}
fileReader = null;
}