Exemple #1
0
        static void Main(string[] args)
        {
            var id  = new SeqId("XR_242110", 1);
            var fac = new EntrezSequenceFactory();
            var seq = fac.Get(id);

            Console.WriteLine($"{id.ToString()} at 0 = {seq[0]}");
        }
Exemple #2
0
    public override string ToString()
    {
        var  sb      = new StringBuilder("FriendRequest(");
        bool __first = true;

        if (EMid != null && __isset.eMid)
        {
            if (!__first)
            {
                sb.Append(", ");
            }
            __first = false;
            sb.Append("EMid: ");
            EMid.ToString(sb);
        }
        if (Mid != null && __isset.mid)
        {
            if (!__first)
            {
                sb.Append(", ");
            }
            __first = false;
            sb.Append("Mid: ");
            Mid.ToString(sb);
        }
        if (__isset.direction)
        {
            if (!__first)
            {
                sb.Append(", ");
            }
            __first = false;
            sb.Append("Direction: ");
            Direction.ToString(sb);
        }
        if (__isset.method)
        {
            if (!__first)
            {
                sb.Append(", ");
            }
            __first = false;
            sb.Append("Method: ");
            Method.ToString(sb);
        }
        if (Param != null && __isset.param)
        {
            if (!__first)
            {
                sb.Append(", ");
            }
            __first = false;
            sb.Append("Param: ");
            Param.ToString(sb);
        }
        if (__isset.timestamp)
        {
            if (!__first)
            {
                sb.Append(", ");
            }
            __first = false;
            sb.Append("Timestamp: ");
            Timestamp.ToString(sb);
        }
        if (__isset.seqId)
        {
            if (!__first)
            {
                sb.Append(", ");
            }
            __first = false;
            sb.Append("SeqId: ");
            SeqId.ToString(sb);
        }
        if (DisplayName != null && __isset.displayName)
        {
            if (!__first)
            {
                sb.Append(", ");
            }
            __first = false;
            sb.Append("DisplayName: ");
            DisplayName.ToString(sb);
        }
        if (PicturePath != null && __isset.picturePath)
        {
            if (!__first)
            {
                sb.Append(", ");
            }
            __first = false;
            sb.Append("PicturePath: ");
            PicturePath.ToString(sb);
        }
        if (PictureStatus != null && __isset.pictureStatus)
        {
            if (!__first)
            {
                sb.Append(", ");
            }
            __first = false;
            sb.Append("PictureStatus: ");
            PictureStatus.ToString(sb);
        }
        sb.Append(")");
        return(sb.ToString());
    }
Exemple #3
0
        public ISequence Get(SeqId id)
        {
            if (id == null)
            {
                throw new ArgumentNullException("id");
            }
            ServicePointManager.ServerCertificateValidationCallback = delegate { return(true); };
            WebClient web     = new WebClient();
            string    address = $"https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=nuccore&id={id.ToString()}&rettype=fasta&retmode=text";
            var       fasta   = web.DownloadString(address);
            var       result  = fasta.Split('\n');
            var       sb      = new StringBuilder();

            for (int i = 1; i < result.Length; ++i)
            {
                sb.Append(result[i]);
            }
            return(SequenceUtils.SequenceFromString(id, sb.ToString()));
        }