public void BuildAPSIMXRuntimeEnvironmentWithRuntimePackage()
{
string binDirectory = Path.GetDirectoryName(Assembly.GetExecutingAssembly().Location);
string runtimeDirectory = Path.Combine(binDirectory, "ApsimX-2473");
// Remove old runtime directory if it exists.
if (Directory.Exists(runtimeDirectory))
{
Directory.Delete(runtimeDirectory, true);
}
// Build the new runtime environment.
APSIMSpecification simulation = GetDefaultSimulationSpec();
List <APSIMSpecification> simulations = new List <APSIMSpecification>();
RuntimeEnvironment environment = new RuntimeEnvironment
{
APSIMxBuildNumber = 2473 // issue number that was resovled.
};
simulations.Add(simulation);
RunYPJob job = new RunYPJob(simulations, environment);
// Make sure it is built correctly.
Assert.IsTrue(Directory.Exists(runtimeDirectory));
string modelsExe = Path.Combine(runtimeDirectory, "Bin", "Models.exe");
Assert.IsTrue(File.Exists(modelsExe));
// Remove newly created runtime directory
Directory.Delete(runtimeDirectory, true);
}
public void RunAPSIMXGetOutputs()
{
APSIMSpecification simulation = GetDefaultSimulationSpec();
List <APSIMSpecification> simulations = new List <APSIMSpecification>();
simulations.Add(simulation);
RuntimeEnvironment environment = new RuntimeEnvironment
{
APSIMxBuildNumber = 2473 // issue number that was resovled.
};
RunYPJob job = new RunYPJob(simulations, environment);
IJobRunner runner = new JobRunnerAsync();
runner.Run(job, wait: true);
// Make sure we don't have an error.
Assert.AreEqual(job.Errors.Count, 0);
// Make sure we have a daily output table.
Assert.AreEqual(job.Outputs.Tables.Count, 1);
Assert.AreEqual(job.Outputs.Tables[0].TableName, "Daily");
double[] biomass = DataTableUtilities.GetColumnAsDoubles(job.Outputs.Tables[0], "Wheat.Aboveground.Wt");
Assert.IsTrue(MathUtilities.Max(biomass) > 5); // make sure something is growing.
}
/// <summary>Runs the job (.xml file) specified on the command line.</summary>
/// <returns>True if something was run.</returns>
private static bool RunJobFromCommandLine(Dictionary <string, string> appSettings)
{
if (appSettings.ContainsKey("FileName"))
{
string jobFileName = appSettings["FileName"];
if (File.Exists(jobFileName))
{
appSettings.TryGetValue("APSIMXExecutable", out string executable);
string jobXML = File.ReadAllText(jobFileName);
string jobName = Path.GetFileNameWithoutExtension(jobFileName);
var environment = new APSIM.Cloud.Shared.RuntimeEnvironment
{
APSIMRevision = appSettings["APSIMRevision"],
RuntimePackage = appSettings["RuntimePackage"],
};
RunYPJob job = new RunYPJob(jobXML, environment)
{
ApsimXExecutable = executable
};
if (job.Errors.Count == 0)
{
IJobRunner runner = new JobRunnerAsync();
runner.Run(job, wait: true);
}
if (job.AllFilesZipped != null)
{
string destZipFileName = Path.ChangeExtension(jobFileName, ".out.zip");
using (Stream s = File.Create(destZipFileName))
{
job.AllFilesZipped.Seek(0, SeekOrigin.Begin);
job.AllFilesZipped.CopyTo(s);
}
}
if (job.Errors.Count > 0)
{
string msg = string.Empty;
foreach (string error in job.Errors)
{
msg += error + Environment.NewLine;
}
throw new Exception(msg);
}
return(true);
}
}
return(false);
}
public void APSIMSpecificationTests_CreateJobFromApsimSpecXML()
{
APSIMSpecification spec = new APSIMSpecification()
{
Name = "NameOfPaddock",
StartDate = new DateTime(2016, 4, 1),
EndDate = new DateTime(2016, 12, 1),
NowDate = new DateTime(2016, 7, 1),
StationNumber = 41023,
RunType = APSIMSpecification.RunTypeEnum.Normal,
StubbleMass = 100,
StubbleType = "Wheat",
Samples = new List <Sample>()
{
new Sample()
{
Thickness = new double[] { 100, 300, 300, 300 },
NO3 = new double[] { 34, 6.9, 3.1, 1.8 },
NH4 = new double[] { 5.5, 1.8, 1.8, 1.5 },
SW = new double[] { 0.13, 0.18, 0.20, 0.24 },
SWUnits = Sample.SWUnitsEnum.Gravimetric,
}
},
SoilPath = "Soils/Australia/Victoria/Wimmera/Clay (Rupanyup North No742)",
Management = new List <Management>()
{
new Sow()
{
Crop = "Wheat",
Date = new DateTime(2016, 5, 1),
}
}
};
List <APSIMSpecification> simulations = new List <APSIMSpecification>()
{
spec
};
RuntimeEnvironment environment = new RuntimeEnvironment
{
APSIMRevision = "Apsim7.8-R4013"
};
string xml = XmlUtilities.Serialise(simulations, true);
RunYPJob job = new RunYPJob(xml, environment);
Assert.IsNotNull(job.GetNextJobToRun());
}
/// <summary>
/// Get the next job from the server.
/// </summary>
/// <returns></returns>
private IJobManager GetJobFromServer()
{
IJobManager nextJob = null;
while (nextJob == null && !cancel)
{
using (JobsService.JobsClient jobsClient = new JobsService.JobsClient())
{
JobsService.Job runningJobDescription = jobsClient.GetNextToRun();
if (runningJobDescription != null)
{
nameOfCurrentJob = runningJobDescription.Name;
string jobXML = jobsClient.GetJobXML(nameOfCurrentJob);
if (IsF4PJob(runningJobDescription.Name) == true)
{
RuntimeEnvironment environment = new RuntimeEnvironment
{
AusfarmRevision = appSettings["AusfarmRevision"],
};
nextJob = new RunF4PJob(jobXML, environment);
}
else
{
RuntimeEnvironment environment = new RuntimeEnvironment
{
APSIMRevision = appSettings["APSIMRevision"],
RuntimePackage = appSettings["RuntimePackage"],
};
nextJob = new RunYPJob(jobXML, environment);
if ((nextJob as RunYPJob).Errors.Count > 0)
{
UpdateServerForCompletedJob(nextJob);
nextJob = null;
}
}
}
else
{
// No jobs to run so wait a bit.
Thread.Sleep(5 * 1000); // 5 sec.
}
}
}
return(nextJob);
}
public void BuildAPSIMRuntimeEnvironmentWithRuntimePackage()
{
string binDirectory = Path.GetDirectoryName(Assembly.GetExecutingAssembly().Location);
string runtimeDirectory = Path.Combine(binDirectory, "Apsim7.8-R4000-Testing");
// Remove old runtime directory if it exists.
if (Directory.Exists(runtimeDirectory))
{
Directory.Delete(runtimeDirectory, true);
}
// Build the new runtime environment.
APSIMSpecification simulation = GetDefaultSimulationSpec();
List <APSIMSpecification> simulations = new List <APSIMSpecification>();
RuntimeEnvironment environment = new RuntimeEnvironment
{
APSIMRevision = "Apsim7.8-R4000",
RuntimePackage = "Testing"
};
simulations.Add(simulation);
RunYPJob job = new RunYPJob(simulations, environment);
// Make sure it is built correctly.
Assert.IsTrue(Directory.Exists(runtimeDirectory));
string apsimExe = Path.Combine(runtimeDirectory, "Temp", "Model", "Apsim.exe");
Assert.IsTrue(File.Exists(apsimExe));
string testFileName = Path.Combine(runtimeDirectory, "Temp", "Model", "Test.txt");
Assert.AreEqual(File.ReadAllText(testFileName), "Test contents");
// Remove newly created runtime directory
Directory.Delete(runtimeDirectory, true);
}
public void RunAPSIMGetError()
{
APSIMSpecification simulation = GetDefaultSimulationSpec();
(simulation.Management[0] as Sow).Cultivar = string.Empty;
List <APSIMSpecification> simulations = new List <APSIMSpecification>();
simulations.Add(simulation);
RuntimeEnvironment environment = new RuntimeEnvironment
{
APSIMRevision = "Apsim7.8-R4013"
};
RunYPJob job = new RunYPJob(simulations, environment);
IJobRunner runner = new JobRunnerAsync();
runner.Run(job, wait: true);
// Make sure we have an error.
Assert.AreEqual(job.Errors.Count, 1);
Assert.AreEqual(job.Errors[0], "Cannot sow plant - : Cultivar not specified\r\n Component name: Paddock.Wheat");
}
public void RunAPSIMGetOutputs()
{
APSIMSpecification simulation = GetDefaultSimulationSpec();
List <APSIMSpecification> simulations = new List <APSIMSpecification>();
simulations.Add(simulation);
RuntimeEnvironment environment = new RuntimeEnvironment
{
APSIMRevision = "Apsim7.8-R4013"
};
RunYPJob job = new RunYPJob(simulations, environment);
IJobRunner runner = new JobRunnerAsync();
runner.Run(job, wait: true);
// Make sure we don't have an error.
Assert.AreEqual(job.Errors.Count, 0);
// Make sure we have a daily output table.
Assert.AreEqual(job.Outputs.Tables.Count, 3);
Assert.AreEqual(job.Outputs.Tables[0].TableName, "Summary");
Assert.AreEqual(job.Outputs.Tables[1].TableName, "YieldProphetDaily");
Assert.AreEqual(job.Outputs.Tables[1].Rows.Count, 92);
double[] biomass = DataTableUtilities.GetColumnAsDoubles(job.Outputs.Tables[1], "biomass");
Assert.IsTrue(MathUtilities.Max(biomass) > 20.0); // make sure something is growing.
// Make sure we have a depth table.
Assert.AreEqual(job.Outputs.Tables[2].TableName, "YieldProphetDepth");
Assert.AreEqual(job.Outputs.Tables[2].Rows.Count, 8);
double[] sw = DataTableUtilities.GetColumnAsDoubles(job.Outputs.Tables[2], "sw");
Assert.IsTrue(MathUtilities.Max(sw) > 0.0); // make sure there are sw values
}
/// <summary>Runs the job (.xml file) specified on the command line.</summary>
/// <returns>True if something was run.</returns>
private static bool RunJobFromCommandLine(Dictionary <string, string> appSettings)
{
if (appSettings.ContainsKey("FileName"))
{
string jobFileName = appSettings["FileName"];
if (File.Exists(jobFileName))
{
var ypEnvironment = new APSIM.Cloud.Shared.RuntimeEnvironment
{
APSIMRevision = appSettings["APSIMRevision"],
RuntimePackage = appSettings["RuntimePackage"],
};
if (appSettings.ContainsKey("UpdateFile"))
{
YieldProphetOld.UpdateFile(jobFileName);
return(true);
}
else if (appSettings.ContainsKey("ConvertToAPSIM"))
{
string jobXML = File.ReadAllText(jobFileName);
RunYPJob job = new RunYPJob(jobXML, ypEnvironment, createSims: false);
AllocConsole();
Console.WriteLine(job.WorkingDirectory);
Console.WriteLine();
if (job.Errors != null)
{
string msg = null;
foreach (string error in job.Errors)
{
msg += error + Environment.NewLine;
}
throw new Exception(msg);
}
return(true);
}
else
{
appSettings.TryGetValue("APSIMXExecutable", out string executable);
string jobXML = File.ReadAllText(jobFileName);
string jobName = Path.GetFileNameWithoutExtension(jobFileName);
IYPJob job = null;
if (jobXML.Contains("Farm4Prophet"))
{
var environment = new APSIM.Cloud.Shared.RuntimeEnvironment
{
AusfarmRevision = appSettings["AusfarmRevision"],
};
job = new RunF4PJob(jobXML, environment);
}
else
{
job = new RunYPJob(jobXML, ypEnvironment)
{
ApsimXExecutable = executable
};
}
if (job.Errors == null || job.Errors.Count == 0)
{
IJobRunner runner = new JobRunnerAsync();
runner.Run(job as IJobManager, wait: true);
}
if (job.AllFilesZipped != null)
{
string destZipFileName = Path.ChangeExtension(jobFileName, ".out.zip");
using (Stream s = File.Create(destZipFileName))
{
job.AllFilesZipped.Seek(0, SeekOrigin.Begin);
job.AllFilesZipped.CopyTo(s);
}
}
if (job.Errors != null && job.Errors.Count > 0)
{
string msg = string.Empty;
foreach (string error in job.Errors)
{
msg += error + Environment.NewLine;
}
throw new Exception(msg);
}
return(true);
}
}
}
return(false);
}
