public async Task <ActionResult> GetStatus(long id)
{
PublicationManager publicationManager = new PublicationManager();
Broker broker =
publicationManager.GetBroker()
.Where(b => b.Name.ToLower().Equals("gfbio dev1"))
.FirstOrDefault();
if (broker != null)
{
//create a gfbio api webservice manager
GFBIOWebserviceManager gfbioWebserviceManager = new GFBIOWebserviceManager(broker);
string roStatusJsonResult = await gfbioWebserviceManager.GetStatusByResearchObjectById(id);
//get status and store ro
List <GFBIOResearchObjectStatus> gfbioRoStatusList =
new JavaScriptSerializer().Deserialize <List <GFBIOResearchObjectStatus> >(
roStatusJsonResult);
GFBIOResearchObjectStatus gfbioRoStatus = gfbioRoStatusList.LastOrDefault();
return(Content(gfbioRoStatus.status));
}
return(Content("no status"));
}
public string Convert(long datasetVersionId)
{
MetadataStructureManager metadataStructureManager = new MetadataStructureManager();
DatasetManager datasetManager = new DatasetManager();
SubmissionManager submissionManager = new SubmissionManager();
PublicationManager publicationManager = new PublicationManager();
try
{
DatasetVersion datasetVersion = datasetManager.GetDatasetVersion(datasetVersionId);
_broker = publicationManager.GetBroker(_broker.Id);
_dataRepo = publicationManager.GetRepository(_dataRepo.Id);
long datasetId = datasetVersion.Dataset.Id;
string name = datasetManager.GetDatasetVersion(datasetVersionId).Dataset.MetadataStructure.Name;
XmlDocument metadata = OutputMetadataManager.GetConvertedMetadata(datasetId,
TransmissionType.mappingFileExport, name, false);
// create links to the api calls of the primary data?
//add all to a zip
//save document and return filepath for download
string path = submissionManager.GetDirectoryPath(datasetId, _broker.Name);
string filename = submissionManager.GetFileNameForDataRepo(datasetId, datasetVersionId, _dataRepo.Name, "xml");
string filepath = Path.Combine(path, filename);
FileHelper.CreateDicrectoriesIfNotExist(path);
metadata.Save(filepath);
return(filepath);
}
finally
{
datasetManager.Dispose();
metadataStructureManager.Dispose();
publicationManager.Dispose();
}
}
//ToDO -> David <- do not store the files on the server
public string Convert(long datasetVersionId)
{
DatasetManager datasetManager = new DatasetManager();
PublicationManager publicationManager = new PublicationManager();
try
{
_broker = publicationManager.GetBroker(_broker.Id);
_dataRepo = publicationManager.GetRepository(_dataRepo.Id);
/***
* Generate a txt file for pangaea
* 1. json metadata
* 2. tabseperated primary Data
*
*
* if data only unstructred, then only metadata
*/
string primaryDataFilePath = "";
#region create primary Data
primaryDataFilePath = generatePrimaryData(datasetVersionId);
#endregion
DatasetVersion datasetVersion = datasetManager.GetDatasetVersion(datasetVersionId);
long datasetId = datasetVersion.Dataset.Id;
long metadataStructureId = datasetVersion.Dataset.MetadataStructure.Id;
DataStructureDataList datastructureDataList = OutputDataStructureManager.GetVariableList(datasetId);
PanageaMetadata metadata = getMetadata(datasetVersion.Metadata, metadataStructureId);
metadata.ParameterIDs = datastructureDataList.Variables;
string json = JsonConvert.SerializeObject(metadata, Formatting.Indented);
SubmissionManager submissionManager = new SubmissionManager();
string path = submissionManager.GetDirectoryPath(datasetId, _broker.Name);
string filename = submissionManager.GetFileNameForDataRepo(datasetVersionId, datasetId, _dataRepo.Name, "txt");
string filepath = Path.Combine(path, filename);
try
{
if (File.Exists(filepath))
{
File.Delete(filepath);
}
FileHelper.Create(filepath).Close();
File.WriteAllText(filepath, json + Environment.NewLine + Environment.NewLine);
if (!string.IsNullOrEmpty(primaryDataFilePath))
{
File.AppendAllText(filepath, File.ReadAllText(primaryDataFilePath));
}
return(filepath);
}
catch (Exception exception)
{
throw exception;
}
return("");
}
finally
{
datasetManager.Dispose();
publicationManager.Dispose();
}
}
public async Task <ActionResult> SendDataToDataRepo(long datasetId, string datarepo)
{
PublicationManager publicationManager = new PublicationManager();
DatasetManager datasetManager = new DatasetManager();
try
{
string zipfilepath = "";
if (Session["ZipFilePath"] != null)
{
zipfilepath = Session["ZipFilePath"].ToString();
}
DatasetVersion datasetVersion = datasetManager.GetDatasetLatestVersion(datasetId);
Publication publication =
publicationManager.GetPublication()
.Where(
p =>
p.DatasetVersion.Id.Equals(datasetVersion.Id) &&
p.Broker.Name.ToLower().Equals(datarepo.ToLower()))
.FirstOrDefault();
if (publication == null)
{
//ToDo [SUBMISSION] -> create broker specfic function
// check case for gfbio
if (datarepo.ToLower().Contains("gfbio"))
{
#region GFBIO
//SubmissionManager publishingManager = new SubmissionManager();
//publishingManager.Load();
//DataRepository dataRepository = publishingManager.DataRepositories.Where(d => d.Name.Equals(datarepo)).FirstOrDefault();
Broker broker =
publicationManager.GetBroker()
.Where(b => b.Name.ToLower().Equals(datarepo.ToLower()))
.FirstOrDefault();
if (broker != null)
{
//Store ro in db
string title = xmlDatasetHelper.GetInformationFromVersion(datasetVersion.Id,
NameAttributeValues.title);
publicationManager.CreatePublication(datasetVersion, broker, title, 0, zipfilepath, "", "no status available");
//sendToGFBIO(broker, datasetId, datasetVersion, zipfilepath);
}
#endregion
}
if (datarepo.ToLower().Contains("pensoft"))
{
#region pensoft
Broker broker =
publicationManager.BrokerRepo.Get()
.Where(b => b.Name.ToLower().Equals(datarepo.ToLower()))
.FirstOrDefault();
Repository repository =
publicationManager.RepositoryRepo.Get()
.Where(b => b.Name.ToLower().Equals(datarepo.ToLower()))
.FirstOrDefault();
string title = xmlDatasetHelper.GetInformationFromVersion(datasetVersion.Id, NameAttributeValues.title);
publicationManager.CreatePublication(datasetVersion, broker, repository, title, 0, zipfilepath, "",
"no status available");
#endregion
}
if (datarepo.ToLower().Equals("generic"))
{
#region GENERIC
Broker broker =
publicationManager.BrokerRepo.Get()
.Where(b => b.Name.ToLower().Equals(datarepo.ToLower()))
.FirstOrDefault();
string title = xmlDatasetHelper.GetInformationFromVersion(datasetVersion.Id, NameAttributeValues.title);
publicationManager.CreatePublication(datasetVersion, broker, title, 0, zipfilepath, "",
"created");
#endregion
}
}
else
{
Json("Publication exist.");
}
}
catch (Exception ex)
{
return(Json(ex.Message));
}
finally
{
publicationManager.Dispose();
datasetManager.Dispose();
}
return(Json(true));
}
