public void Clear()
{
Targets.Clear();
Proteins.Clear();
RegressionResults = null;
ProcessedState = ProcessingState.NotProcessed;
m_featureCount = 0;
}
/// <summary>
/// Clear all proteins without proteoforms.
/// </summary>
public void ClearEmptyProteins()
{
Proteins.Clear();
foreach (var protein in allProteins)
{
if (protein.Value.Proteoforms.Count > 0)
{
Proteins.Add(protein.Key, protein.Value);
}
}
}
/// <summary>
/// Loads data from a peptide identification file
/// </summary>
/// <param name="merge">
/// A <see cref="System.Boolean"/> indicating wether merge the new file with the existing data
/// </param>
public void Load( string path, bool merge ) {
if( !merge || m_Run == 0 ) {
m_InputFiles.Clear();
Proteins.Clear();
Peptides.Clear();
Spectra.Clear();
m_gid = 1;
m_SortedProteins = new SortedList<string, Protein>();
m_Run = 1;
} else
m_Run++;
Load( path );
m_InputFiles.Add( Path.GetFileName(path) );
}
/// <summary>
/// Clears an existing target and protein data
/// </summary>
public void ClearTargets()
{
ConsensusTargets.Clear();
Proteins.Clear();
}