public ScreeningFinal(ProcessingModeEnum processingMode)
{
this.m_ProcessingMode = processingMode;
this.m_Rule = new YellowstonePathology.Business.Rules.Rule();
this.m_Rule.ActionList.Add(IsUserPathologistOrCytotech);
this.m_Rule.ActionList.Add(DoesPriorUnacceptedScreeningExist);
this.m_Rule.ActionList.Add(ArePanelResultsAlreadyAccepted);
this.m_Rule.ActionList.Add(DoesTheResultCodeHaveAnyNines);
this.m_Rule.ActionList.Add(HandleHistorectomyWarning);
this.m_Rule.ActionList.Add(AreThePanelOrderResultsSet);
this.m_Rule.ActionList.Add(SetScreenedByUserData);
this.m_Rule.ActionList.Add(SetScreeningError);
this.m_Rule.ActionList.Add(AddNoChargePeerReviewForEndoGreaterThan40Comment);
this.m_Rule.ActionList.Add(AddPathologistReviewIfDiagnosisIsTwoOrBetter);
this.m_Rule.ActionList.Add(HandleUnsatPrimaryScreeningResult);
this.m_Rule.ActionList.Add(HandleUnsatPathologistReviewScreeningConfirmedResult);
this.m_Rule.ActionList.Add(HandleNoChargePathologistReview);
this.m_Rule.ActionList.Add(HandleNoChargePathologistReviewEndometrialCells);
this.m_Rule.ActionList.Add(AcceptPanelOrder);
this.m_Rule.ActionList.Add(DoesDotReviewExist);
this.m_Rule.ActionList.Add(AddQCReviewIfNecessary);
this.m_Rule.ActionList.Add(HandleImagerError);
this.m_Rule.ActionList.Add(IsOkToFinalPanelSetOrderResult);
this.m_Rule.ActionList.Add(IsQCScreenerSameAsInitialScreener);
this.m_Rule.ActionList.Add(FinalPanelSetOrder);
this.m_Rule.ActionList.Add(HandleScreeningError);
}
public ScreeningFinal(ProcessingModeEnum processingMode)
{
this.m_ProcessingMode = processingMode;
this.m_Rule = new YellowstonePathology.Business.Rules.Rule();
this.m_Rule.ActionList.Add(IsUserPathologistOrCytotech);
this.m_Rule.ActionList.Add(DoesPriorUnacceptedScreeningExist);
this.m_Rule.ActionList.Add(ArePanelResultsAlreadyAccepted);
this.m_Rule.ActionList.Add(DoesTheResultCodeHaveAnyNines);
this.m_Rule.ActionList.Add(HandleHistorectomyWarning);
this.m_Rule.ActionList.Add(AreThePanelOrderResultsSet);
this.m_Rule.ActionList.Add(SetScreenedByUserData);
this.m_Rule.ActionList.Add(SetScreeningError);
this.m_Rule.ActionList.Add(AddNoChargePeerReviewForEndoGreaterThan40Comment);
this.m_Rule.ActionList.Add(AddPathologistReviewIfDiagnosisIsTwoOrBetter);
this.m_Rule.ActionList.Add(HandleUnsatPrimaryScreeningResult);
this.m_Rule.ActionList.Add(HandleUnsatPathologistReviewScreeningConfirmedResult);
this.m_Rule.ActionList.Add(HandleNoChargePathologistReview);
this.m_Rule.ActionList.Add(HandleNoChargePathologistReviewEndometrialCells);
this.m_Rule.ActionList.Add(AcceptPanelOrder);
this.m_Rule.ActionList.Add(DoesDotReviewExist);
this.m_Rule.ActionList.Add(AddQCReviewIfNecessary);
this.m_Rule.ActionList.Add(HandleImagerError);
this.m_Rule.ActionList.Add(IsOkToFinalPanelSetOrderResult);
this.m_Rule.ActionList.Add(IsQCScreenerSameAsInitialScreener);
this.m_Rule.ActionList.Add(FinalPanelSetOrder);
this.m_Rule.ActionList.Add(HandleScreeningError);
}
public void Execute(string screeningType, YellowstonePathology.Business.Test.AccessionOrder cytologyAccessionOrder,
YellowstonePathology.Business.Test.ThinPrepPap.PanelOrderCytology initiatingPanelOrder, ProcessingModeEnum processingMode,
YellowstonePathology.Business.Rules.ExecutionStatus executionStatus)
{
this.m_ScreeningType = screeningType;
this.m_CytologyAccessionOrder = cytologyAccessionOrder;
this.m_InitiatingPanelOrder = initiatingPanelOrder;
this.m_PanelSetOrderCytology = (YellowstonePathology.Business.Test.ThinPrepPap.PanelSetOrderCytology)cytologyAccessionOrder.PanelSetOrderCollection.GetPanelSetOrder(initiatingPanelOrder.ReportNo);
this.m_ProcessingMode = processingMode;
this.m_ExecutionStatus = executionStatus;
this.m_Rule.Execute(this.m_ExecutionStatus);
}
public void Execute(string screeningType, YellowstonePathology.Business.Test.AccessionOrder cytologyAccessionOrder,
YellowstonePathology.Business.Test.ThinPrepPap.PanelOrderCytology initiatingPanelOrder, ProcessingModeEnum processingMode,
YellowstonePathology.Business.Rules.ExecutionStatus executionStatus)
{
this.m_ScreeningType = screeningType;
this.m_CytologyAccessionOrder = cytologyAccessionOrder;
this.m_InitiatingPanelOrder = initiatingPanelOrder;
this.m_PanelSetOrderCytology = (YellowstonePathology.Business.Test.ThinPrepPap.PanelSetOrderCytology)cytologyAccessionOrder.PanelSetOrderCollection.GetPanelSetOrder(initiatingPanelOrder.ReportNo);
this.m_ProcessingMode = processingMode;
this.m_ExecutionStatus = executionStatus;
this.m_Rule.Execute(this.m_ExecutionStatus);
}
/// <summary>
/// Process directory or file with given path
/// </summary>
/// <param name="sourcePath">File or directory to be processed</param>
/// <param name="outputPath">Path to directory to store results
/// Will be created if it doesn't exist
/// </param>
/// <param name="processAsDocument">If true, all images are processed as a single document</param>
public void ProcessPath(string sourcePath, string outputPath,
IProcessingSettings settings,
ProcessingModeEnum processingMode)
{
List <string> sourceFiles = new List <string>();
if (Directory.Exists(sourcePath))
{
sourceFiles.AddRange(Directory.GetFiles(sourcePath));
sourceFiles.Sort();
}
else if (File.Exists(sourcePath))
{
sourceFiles.Add(sourcePath);
}
else
{
Console.WriteLine("Invalid source path");
return;
}
if (!Directory.Exists(outputPath))
{
Directory.CreateDirectory(outputPath);
}
if (processingMode == ProcessingModeEnum.SinglePage ||
(processingMode == ProcessingModeEnum.MultiPage && sourceFiles.Count == 1))
{
ProcessingSettings fullTextSettings = settings as ProcessingSettings;
foreach (string filePath in sourceFiles)
{
string outputFileName = Path.GetFileNameWithoutExtension(filePath);
string outputFilePath = Path.Combine(outputPath, outputFileName);
Console.WriteLine("Processing " + Path.GetFileName(filePath));
ProcessFile(filePath, outputFilePath, fullTextSettings);
}
}
else if (processingMode == ProcessingModeEnum.MultiPage)
{
ProcessingSettings fullTextSettings = settings as ProcessingSettings;
string outputFileName = "document";
string outputFilePath = Path.Combine(outputPath, outputFileName);
ProcessDocument(sourceFiles, outputFilePath, fullTextSettings);
}
else if (processingMode == ProcessingModeEnum.ProcessTextField)
{
TextFieldProcessingSettings fieldSettings = settings as TextFieldProcessingSettings;
foreach (string filePath in sourceFiles)
{
string outputFileName = Path.GetFileNameWithoutExtension(filePath);
string ext = ".xml";
string outputFilePath = Path.Combine(outputPath, outputFileName + ext);
Console.WriteLine("Processing " + Path.GetFileName(filePath));
ProcessTextField(filePath, outputFilePath, fieldSettings);
}
}
else if (processingMode == ProcessingModeEnum.ProcessMrz)
{
foreach (string filePath in sourceFiles)
{
string outputFileName = Path.GetFileNameWithoutExtension(filePath);
string ext = ".xml";
string outputFilePath = Path.Combine(outputPath, outputFileName + ext);
Console.WriteLine("Processing " + Path.GetFileName(filePath));
ProcessMrz(filePath, outputFilePath);
}
}
}
/// <summary>
/// Process directory or file with given path
/// </summary>
/// <param name="sourcePath">File or directory to be processed</param>
/// <param name="outputPath">Path to directory to store results
/// Will be created if it doesn't exist
/// </param>
/// <param name="processAsDocument">If true, all images are processed as a single document</param>
public void ProcessPath(string sourcePath, string outputPath,
IProcessingSettings settings,
ProcessingModeEnum processingMode)
{
List<string> sourceFiles = new List<string>();
if (Directory.Exists(sourcePath))
{
sourceFiles.AddRange(Directory.GetFiles(sourcePath));
sourceFiles.Sort();
}
else if (File.Exists(sourcePath))
{
sourceFiles.Add(sourcePath);
}
else
{
Console.WriteLine("Invalid source path");
return;
}
if (!Directory.Exists(outputPath))
{
Directory.CreateDirectory(outputPath);
}
if (processingMode == ProcessingModeEnum.SinglePage ||
(processingMode == ProcessingModeEnum.MultiPage && sourceFiles.Count == 1) )
{
ProcessingSettings fullTextSettings = settings as ProcessingSettings;
foreach (string filePath in sourceFiles)
{
string outputFileName = Path.GetFileNameWithoutExtension(filePath);
string outputFilePath = Path.Combine(outputPath, outputFileName);
Console.WriteLine("Processing " + Path.GetFileName(filePath));
ProcessFile(filePath, outputFilePath, fullTextSettings);
}
}
else if(processingMode == ProcessingModeEnum.MultiPage)
{
ProcessingSettings fullTextSettings = settings as ProcessingSettings;
string outputFileName = "document";
string outputFilePath = Path.Combine(outputPath, outputFileName);
ProcessDocument(sourceFiles, outputFilePath, fullTextSettings);
}
else if (processingMode == ProcessingModeEnum.ProcessTextField)
{
TextFieldProcessingSettings fieldSettings = settings as TextFieldProcessingSettings;
foreach (string filePath in sourceFiles)
{
string outputFileName = Path.GetFileNameWithoutExtension(filePath);
string ext = ".xml";
string outputFilePath = Path.Combine(outputPath, outputFileName + ext);
Console.WriteLine("Processing " + Path.GetFileName(filePath));
ProcessTextField(filePath, outputFilePath, fieldSettings);
}
}
else if (processingMode == ProcessingModeEnum.ProcessMrz)
{
foreach (string filePath in sourceFiles)
{
string outputFileName = Path.GetFileNameWithoutExtension(filePath);
string ext = ".xml";
string outputFilePath = Path.Combine(outputPath, outputFileName + ext);
Console.WriteLine("Processing " + Path.GetFileName(filePath));
ProcessMrz(filePath, outputFilePath);
}
}
}
static void Main(string[] args)
{
try
{
Test tester = new Test();
ProcessingModeEnum processingMode = ProcessingModeEnum.SinglePage;
string outFormat = null;
string profile = null;
string language = "english";
string customOptions = "";
var p = new OptionSet()
{
{ "asDocument", v => processingMode = ProcessingModeEnum.MultiPage },
{ "asTextField", v => processingMode = ProcessingModeEnum.ProcessTextField },
{ "asFields", v => processingMode = ProcessingModeEnum.ProcessFields },
{ "asMRZ", var => processingMode = ProcessingModeEnum.ProcessMrz },
{ "captureData", v => processingMode = ProcessingModeEnum.CaptureData },
{ "out=", (string v) => outFormat = v },
{ "profile=", (string v) => profile = v },
{ "lang=", (string v) => language = v },
{ "options=", (string v) => customOptions = v }
};
List <string> additionalArgs = null;
try
{
additionalArgs = p.Parse(args);
}
catch (OptionException)
{
Console.WriteLine("Invalid arguments.");
displayHelp();
return;
}
string sourcePath = null;
string xmlPath = null;
string targetPath = Directory.GetCurrentDirectory();
string templateName = null;
switch (processingMode)
{
case ProcessingModeEnum.SinglePage:
case ProcessingModeEnum.MultiPage:
case ProcessingModeEnum.ProcessTextField:
case ProcessingModeEnum.ProcessMrz:
if (additionalArgs.Count != 2)
{
displayHelp();
return;
}
sourcePath = additionalArgs[0];
targetPath = additionalArgs[1];
break;
case ProcessingModeEnum.ProcessFields:
if (additionalArgs.Count != 3)
{
displayHelp();
return;
}
sourcePath = additionalArgs[0];
xmlPath = additionalArgs[1];
targetPath = additionalArgs[2];
break;
case ProcessingModeEnum.CaptureData:
if (additionalArgs.Count != 3)
{
displayHelp();
return;
}
sourcePath = additionalArgs[0];
templateName = additionalArgs[1];
targetPath = additionalArgs[2];
break;
}
if (!Directory.Exists(targetPath))
{
Directory.CreateDirectory(targetPath);
}
if (String.IsNullOrEmpty(outFormat))
{
if (processingMode == ProcessingModeEnum.ProcessFields ||
processingMode == ProcessingModeEnum.ProcessTextField ||
processingMode == ProcessingModeEnum.ProcessMrz ||
processingMode == ProcessingModeEnum.CaptureData)
{
outFormat = "xml";
}
else
{
outFormat = "txt";
}
}
if (outFormat != "xml" &&
(processingMode == ProcessingModeEnum.ProcessFields ||
processingMode == ProcessingModeEnum.ProcessTextField) ||
processingMode == ProcessingModeEnum.CaptureData)
{
Console.WriteLine("Only xml is supported as output format for field-level recognition.");
outFormat = "xml";
}
if (processingMode == ProcessingModeEnum.SinglePage || processingMode == ProcessingModeEnum.MultiPage)
{
ProcessingSettings settings = buildSettings(language, outFormat, profile);
settings.CustomOptions = customOptions;
tester.ProcessPath(sourcePath, targetPath, settings, processingMode);
}
else if (processingMode == ProcessingModeEnum.ProcessTextField)
{
TextFieldProcessingSettings settings = buildTextFieldSettings(language, customOptions);
tester.ProcessPath(sourcePath, targetPath, settings, processingMode);
}
else if (processingMode == ProcessingModeEnum.ProcessFields)
{
string outputFilePath = Path.Combine(targetPath, Path.GetFileName(sourcePath) + ".xml");
tester.ProcessFields(sourcePath, xmlPath, outputFilePath);
}
else if (processingMode == ProcessingModeEnum.ProcessMrz)
{
tester.ProcessPath(sourcePath, targetPath, null, processingMode);
}
else if (processingMode == ProcessingModeEnum.CaptureData)
{
string outputFilePath = Path.Combine(targetPath, Path.GetFileName(sourcePath) + ".xml");
tester.CaptureData(sourcePath, templateName, outputFilePath);
}
}
catch (Exception e)
{
Console.WriteLine("Error: ");
Console.WriteLine(e.Message);
}
}
