/// <summary>
/// The default version of Setup(...) loads requested pipelines and calls Setup(...) on them and normalizes their probabilities.
/// If your individual prototype might need to know special things about the species (like parameters stored in it),
/// then when you override this Setup method, you'll need to set those parameters BEFORE you call super.Setup(...),
/// because the Setup(...) code in Species sets up the prototype.
/// </summary>
/// <seealso cref="IPrototype.Setup(IEvolutionState, IParameter)" />
public virtual void Setup(IEvolutionState state, IParameter paramBase)
{
var def = DefaultBase;
// load the breeding pipeline
Pipe_Prototype = (BreedingSource)state.Parameters.GetInstanceForParameter(paramBase.Push(P_PIPE), def.Push(P_PIPE), typeof(BreedingSource));
Pipe_Prototype.Setup(state, paramBase.Push(P_PIPE));
// I promised over in BreedingSource.java that this method would get called.
state.Output.ExitIfErrors();
// load our individual prototype
I_Prototype = (Individual)(state.Parameters.GetInstanceForParameter(paramBase.Push(P_INDIVIDUAL), def.Push(P_INDIVIDUAL), typeof(Individual)));
// set the species to me before setting up the individual, so they know who I am
I_Prototype.Species = this;
I_Prototype.Setup(state, paramBase.Push(P_INDIVIDUAL));
// load our fitness
F_Prototype = (Fitness)state.Parameters.GetInstanceForParameter(paramBase.Push(P_FITNESS), def.Push(P_FITNESS), typeof(Fitness));
F_Prototype.Setup(state, paramBase.Push(P_FITNESS));
}