/// <summary>
/// Wraps up the resources into a template.ZIP file
/// and then runs a test on the source recording.
/// </summary>
public static void Execute(Arguments arguments)
{
if (arguments == null)
{
arguments = Dev();
}
string title = "# EDIT TEMPLATE.";
string date = "# DATE AND TIME: " + DateTime.Now;
Log.WriteLine(title);
Log.WriteLine(date);
//ZIP THE OUTPUT FILES
const bool ZipOutput = true;
FileInfo iniPath = arguments.Config;
string[] nameComponents = (Path.GetFileNameWithoutExtension(iniPath.Name)).Split('_');
string targetName = nameComponents[0] + "_" + nameComponents[1];
//i: Set up the file names
DirectoryInfo outputDir = iniPath.Directory;
FileInfo targetImagePath = outputDir.CombineFile(targetName + "_target.png"); // input image file
FileInfo binaryOpPath = outputDir.CombineFile(targetName + "_binary.bmp");
FileInfo trinaryOpPath = outputDir.CombineFile(targetName + "_trinary.bmp");
FileInfo sprOpPath = outputDir.CombineFile(targetName + "_spr.txt"); // syntactic pattern recognition file
//additional files to be zipped up with template
FileInfo targetPath = outputDir.CombineFile(targetName + "_target.txt");
FileInfo targetNoNoisePath = outputDir.CombineFile(targetName + "_targetNoNoise.txt");
FileInfo noisePath = outputDir.CombineFile(targetName + "_noise.txt");
//ii: READ PARAMETER VALUES FROM INI FILE
var config = new ConfigDictionary(iniPath);
Dictionary <string, string> dict = config.GetTable();
string sourceFile = dict[FeltTemplate_Create.key_SOURCE_RECORDING];
string sourceDir = dict[FeltTemplate_Create.key_SOURCE_DIRECTORY];
double dB_Threshold = double.Parse(dict[FeltTemplate_Create.key_DECIBEL_THRESHOLD]);
double maxTemplateIntensity = double.Parse(dict[FeltTemplate_Create.key_TEMPLATE_MAX_INTENSITY]);
int neighbourhood = int.Parse(dict[FeltTemplate_Create.key_DONT_CARE_NH]); //the do not care neighbourhood
int lineLength = int.Parse(dict[FeltTemplate_Create.key_LINE_LENGTH]);
double templateThreshold = dB_Threshold / maxTemplateIntensity;
int bitmapThreshold = (int)(255 - (templateThreshold * 255));
Log.WriteLine("#################################### WRITE THE BINARY TEMPLATE ##################################");
Bitmap bitmap = ImageTools.ReadImage2Bitmap(targetImagePath.FullName);
var binaryBmp = Image2BinaryBitmap(bitmap, bitmapThreshold);
binaryBmp.Save(binaryOpPath.FullName);
Log.WriteLine("#################################### WRITE THE TRINARY TEMPLATE ##################################");
var trinaryBmp = Image2TrinaryBitmap(binaryBmp, neighbourhood);
trinaryBmp.Save(trinaryOpPath.FullName);
Log.WriteLine("#################################### WRITE THE SPR TEMPLATE ##################################");
double[,] matrix = ImageTools.GreyScaleImage2Matrix(bitmap);
matrix = DataTools.MatrixRotate90Clockwise(matrix); //rows=time cols=freq.
//ImageTools.DrawMatrix(matrix, @"C:\SensorNetworks\Output\FELT_LewinsRail1\SPR_output1.bmp");
//int smallLengthThreshold = 10;
//var tuple = SPT.doSPT(matrix, templateThreshold, smallLengthThreshold);
//matrix = tuple.Item1;
//ImageTools.DrawMatrix(matrix, @"C:\SensorNetworks\Output\FELT_LewinsRail1\SPR_output2.bmp");
char[,] spr = SprTools.Target2SymbolicTracks(matrix, templateThreshold, lineLength);
FileTools.WriteMatrix2File(spr, sprOpPath.FullName);
var tuple1 = FindMatchingEvents.Execute_One_Spr_Match(spr, matrix, templateThreshold);
double sprScore = tuple1.Item1;
double dBScore = sprScore * maxTemplateIntensity;
Log.WriteLine("#################################### WRITE THE OSCILATION TEMPLATE ##################################");
double[,] target = FileTools.ReadDoubles2Matrix(targetPath.FullName);
// oscillations in time
double[,] rotatedtarget = DataTools.MatrixRotate90Clockwise(target);
var colSums = DataTools.GetColumnsAverages(rotatedtarget);
double[] periods = Oscillations2010.PeriodicityAnalysis(colSums); // frame periodicity
LoggedConsole.WriteLine("Periodicity (sec) = {0:f3}, {1:f3}, {2:f3}",
periods[0] * FeltTemplates_Use.FeltFrameOffset, periods[1] * FeltTemplates_Use.FeltFrameOffset, periods[2] * FeltTemplates_Use.FeltFrameOffset);
//double oscilFreq = indexOfMaxValue / dctDuration * 0.5; //Times 0.5 because index = Pi and not 2Pi
// oscillations in freq i.e. harmonics
colSums = DataTools.GetColumnsAverages(target);
periods = Oscillations2010.PeriodicityAnalysis(colSums);
LoggedConsole.WriteLine("Periodicity (Hz) = {0:f0}, {1:f0}, {2:f0}.",
periods[0] * FeltTemplates_Use.FeltFreqBinWidth, periods[1] * FeltTemplates_Use.FeltFreqBinWidth, periods[2] * FeltTemplates_Use.FeltFreqBinWidth);
//double oscilFreq = indexOfMaxValue / dctDuration * 0.5; //Times 0.5 because index = Pi and not 2Pi
//FileTools.WriteMatrix2File(spr, sprOpPath);
// ZIP THE OUTPUT
Log.WriteLine("#################################### ZIP THE TEMPLATES ##################################");
if (ZipOutput == true)
{
var filenames = new[]
{ iniPath, targetImagePath, binaryOpPath, targetPath, targetNoNoisePath, noisePath };
string biOutZipFile = outputDir + targetName + "_binaryTemplate.zip";
//FileTools.ZipFiles(filenames, biOutZipFile);
filenames = new[]
{ iniPath, targetImagePath, trinaryOpPath, targetPath, targetNoNoisePath, noisePath };
string triOutZipFile = outputDir + targetName + "_trinaryTemplate.zip";
//FileTools.ZipFiles(filenames, triOutZipFile);
filenames = new[]
{ iniPath, targetImagePath, sprOpPath, targetPath, targetNoNoisePath, noisePath };
string sprOutZipFile = outputDir + targetName + "_syntacticTemplate.zip";
//FileTools.ZipFiles(filenames, sprOutZipFile);
// Zipping files can be done by using standard .NET 4.6 System.IO.Compression
// however, this code hasn't been used in years and I've opted to just comment out the lines above
throw new NotImplementedException("Zipping template files intentionally broken");
}
Log.WriteLine("\n\n#################################### TEST THE EXTRACTED EVENT ON SOURCE FILE ##################################");
//vi: TEST THE EVENT ON ANOTHER FILE
//felt "C:\SensorNetworks\WavFiles\Canetoad\DM420010_128m_00s__130m_00s - Toads.mp3" C:\SensorNetworks\Output\FELT_CaneToad\FELT_CaneToad_Params.txt events.txt
//string testRecording = @"C:\SensorNetworks\WavFiles\Gecko\Suburban_March2010\geckos_suburban_104.mp3";
//string testRecording = @"C:\SensorNetworks\WavFiles\Gecko\Suburban_March2010\geckos_suburban_18.mp3";
//string testRecording = @"C:\SensorNetworks\WavFiles\Currawongs\Currawong_JasonTagged\West_Knoll_Bees_20091102-170000.mp3";
//string testRecording = @"C:\SensorNetworks\WavFiles\Curlew\Curlew2\Top_Knoll_-_St_Bees_20090517-210000.wav";
string listOpDir = "C:\\SensorNetworks\\Output\\FELT_templateList\\";
string templateListPath = listOpDir + "templateTestList.txt";
var list = new List <string>();
list.Add("#" + outputDir + targetName + "_binaryTemplate.zip");
list.Add("#" + outputDir + targetName + "_trinaryTemplate.zip");
list.Add("#" + outputDir + targetName + "_syntacticTemplate.zip");
FileTools.Append2TextFile(templateListPath, list); //write the template.ZIP file
//TEST THE TEMPLATE ON SOURCE FILE
//string[] arguments = new string[3];
/*
* var args = new FeltTemplates_Use.Arguments()
* {
* Source = "",
* arguments[0] = sourceDir + "\\" + sourceFile;
* arguments[1] = templateListPath;
* arguments[2] = listOpDir;
*
* }*/
//FeltTemplates_Use.Dev(arguments);
Log.WriteLine("# Finished everything!");
}
