static void Main(string[] args)
{
PointSet swissPoints = new PointSet("iris.txt");
LightWeightGraph minIris = LightWeightGraph.GetMinKnnGraph(swissPoints.GetDistanceMatrix());
var map = minIris.GetEdgeIndexMap();
float[] BCEdge = NetMining.Graphs.BetweenessCentrality.BrandesBcEdges(minIris);
for (int n = 0; n < minIris.NumNodes; n++)
{
foreach (int e in minIris.Nodes[n].Edge)
{
KeyValuePair <int, int> edge = new KeyValuePair <int, int>(n, e);
if (map.ContainsKey(edge))
{
Console.WriteLine("{0} {1} = {2}", edge.Key, edge.Value, BCEdge[map[edge]]);
}
}
}
//minSwiss.SaveGML("iris.gml");
//minSwiss.SaveGraph("iris.graph");
/*
* minSwiss.SaveGML("SwissRoll.gml");
* HVATClust vClust = new HVATClust(swissPoints, 4, false, true, 1);
* Partition p = vClust.GetPartition();
* p.SavePartition("swissRoll", "SwissRoll.txt", p.MetaData);
* //LightWeightGraph lwg = LightWeightGraph.GetGraphFromFile("g.graph");
*
*
* PointSet points = new PointSet("iris.txt");
* var distMatrix = points.GetDistanceMatrix();
*
* var lwg = LightWeightGraph.GetMinKnnGraph(distMatrix, 1);
* lwg.IsWeighted = true;
*
* VAT v = new VAT(lwg);
* var nlwg = v.GetAttackedGraphWithReassignment();
* List<List<int>> components = nlwg.GetComponents();
*
* var dist2_0 = distMatrix.GetReducedDataSet(components[0]);
* var lwg2_0 = LightWeightGraph.GetMinKnnGraph(dist2_0.Mat, 1);
* bool lwg2_0C = lwg2_0.isConnected();
* lwg2_0.IsWeighted = true;
* var dist2_1 = distMatrix.GetReducedDataSet(components[1]);
* var lwg2_1 = LightWeightGraph.GetMinKnnGraph(dist2_1.Mat, 1);
* bool lwg2_1C = lwg2_1.isConnected();
* lwg2_1.IsWeighted = true;
*
* VAT v2_0 = new VAT(lwg2_0);
* List<List<int>> components2_0 = v2_0.GetAttackedGraphWithReassignment().GetComponents();
* VAT v2_1 = new VAT(lwg2_1);
* List<List<int>> components2_1 = v2_1.GetAttackedGraphWithReassignment().GetComponents();
*
*/
Console.ReadKey();
}
public VATClust(DistanceMatrix distanceMatrix, Boolean useWeights, Boolean knnGraph, int knnOffset = 0, float alpha = 1.0f, float beta = 0.0f)
{
_distanceMatrix = distanceMatrix;
UseWeights = useWeights;
KNNGraph = knnGraph;
_alpha = alpha;
_beta = beta;
//Now compute a graph
LightWeightGraph lwg = LightWeightGraph.GetMinKnnGraph(_distanceMatrix, knnOffset);
lwg.IsWeighted = UseWeights;
//Run VAT on it
VATResult = new VAT(lwg, _alpha, _beta);
}
