/// <summary>This computes the average over all folds of the function we're trying to optimize.</summary>
/// <remarks>
/// This computes the average over all folds of the function we're trying to optimize.
/// The input triple contains, in order, the train set, the test set, and the saved state.
/// You don't have to use the saved state if you don't want to.
/// </remarks>
public virtual double ComputeAverage(IToDoubleFunction <Triple <GeneralDataset <L, F>, GeneralDataset <L, F>, CrossValidator.SavedState> > function)
{
double sum = 0;
IEnumerator <Triple <GeneralDataset <L, F>, GeneralDataset <L, F>, CrossValidator.SavedState> > foldIt = Iterator();
while (foldIt.MoveNext())
{
sum += function.ApplyAsDouble(foldIt.Current);
}
return(sum / kFold);
}
public static T GetBestMatched <T>(IList <T> matches, IToDoubleFunction <MatchedExpression> scorer)
where T : MatchedExpression
{
if (matches == null || matches.IsEmpty())
{
return(null);
}
T best = null;
double bestScore = double.NegativeInfinity;
foreach (T m in matches)
{
double s = scorer.ApplyAsDouble(m);
if (best == null || s > bestScore)
{
best = m;
bestScore = s;
}
}
return(best);
}
/// <exception cref="System.IO.IOException"/>
/// <exception cref="System.TypeLoadException"/>
internal virtual ICounter <E> Convert2OneDim(string label, IToDoubleFunction <Pair <E, CandidatePhrase> > scoringFunction, ICollection <CandidatePhrase> allCandidatePhrases, TwoDimensionalCounter <E, CandidatePhrase> positivePatternsAndWords, bool
sqrtPatScore, bool scorePhrasesInPatSelection, ICounter <CandidatePhrase> dictOddsWordWeights, bool useFreqPhraseExtractedByPat)
{
// if (Data.googleNGram.size() == 0 && Data.googleNGramsFile != null) {
// Data.loadGoogleNGrams();
// }
ICounter <E> patterns = new ClassicCounter <E>();
ICounter <CandidatePhrase> googleNgramNormScores = new ClassicCounter <CandidatePhrase>();
ICounter <CandidatePhrase> domainNgramNormScores = new ClassicCounter <CandidatePhrase>();
ICounter <CandidatePhrase> externalFeatWtsNormalized = new ClassicCounter <CandidatePhrase>();
ICounter <CandidatePhrase> editDistanceFromOtherSemanticBinaryScores = new ClassicCounter <CandidatePhrase>();
ICounter <CandidatePhrase> editDistanceFromAlreadyExtractedBinaryScores = new ClassicCounter <CandidatePhrase>();
double externalWtsDefault = 0.5;
ICounter <string> classifierScores = null;
if ((patternScoring.Equals(GetPatternsFromDataMultiClass.PatternScoring.PhEvalInPat) || patternScoring.Equals(GetPatternsFromDataMultiClass.PatternScoring.PhEvalInPatLogP)) && scorePhrasesInPatSelection)
{
foreach (CandidatePhrase gc in allCandidatePhrases)
{
string g = gc.GetPhrase();
if (constVars.usePatternEvalEditDistOther)
{
editDistanceFromOtherSemanticBinaryScores.SetCount(gc, constVars.GetEditDistanceScoresOtherClassThreshold(label, g));
}
if (constVars.usePatternEvalEditDistSame)
{
editDistanceFromAlreadyExtractedBinaryScores.SetCount(gc, 1 - constVars.GetEditDistanceScoresThisClassThreshold(label, g));
}
if (constVars.usePatternEvalGoogleNgram)
{
googleNgramNormScores.SetCount(gc, PhraseScorer.GetGoogleNgramScore(gc));
}
if (constVars.usePatternEvalDomainNgram)
{
// calculate domain-ngram wts
if (Data.domainNGramRawFreq.ContainsKey(g))
{
System.Diagnostics.Debug.Assert((Data.rawFreq.ContainsKey(gc)));
domainNgramNormScores.SetCount(gc, scorePhrases.phraseScorer.GetDomainNgramScore(g));
}
}
if (constVars.usePatternEvalWordClass)
{
int num = constVars.GetWordClassClusters()[g];
if (num == null)
{
num = constVars.GetWordClassClusters()[g.ToLower()];
}
if (num != null && constVars.distSimWeights[label].ContainsKey(num))
{
externalFeatWtsNormalized.SetCount(gc, constVars.distSimWeights[label].GetCount(num));
}
else
{
externalFeatWtsNormalized.SetCount(gc, externalWtsDefault);
}
}
}
if (constVars.usePatternEvalGoogleNgram)
{
googleNgramNormScores = GetPatternsFromDataMultiClass.NormalizeSoftMaxMinMaxScores(googleNgramNormScores, true, true, false);
}
if (constVars.usePatternEvalDomainNgram)
{
domainNgramNormScores = GetPatternsFromDataMultiClass.NormalizeSoftMaxMinMaxScores(domainNgramNormScores, true, true, false);
}
if (constVars.usePatternEvalWordClass)
{
externalFeatWtsNormalized = GetPatternsFromDataMultiClass.NormalizeSoftMaxMinMaxScores(externalFeatWtsNormalized, true, true, false);
}
}
else
{
if ((patternScoring.Equals(GetPatternsFromDataMultiClass.PatternScoring.Logreg) || patternScoring.Equals(GetPatternsFromDataMultiClass.PatternScoring.LOGREGlogP)) && scorePhrasesInPatSelection)
{
Properties props2 = new Properties();
props2.PutAll(props);
props2.SetProperty("phraseScorerClass", "edu.stanford.nlp.patterns.ScorePhrasesLearnFeatWt");
ScorePhrases scoreclassifier = new ScorePhrases(props2, constVars);
System.Console.Out.WriteLine("file is " + props.GetProperty("domainNGramsFile"));
ArgumentParser.FillOptions(typeof(Data), props2);
classifierScores = scoreclassifier.phraseScorer.ScorePhrases(label, allCandidatePhrases, true);
}
}
ICounter <CandidatePhrase> cachedScoresForThisIter = new ClassicCounter <CandidatePhrase>();
foreach (KeyValuePair <E, ClassicCounter <CandidatePhrase> > en in positivePatternsAndWords.EntrySet())
{
foreach (KeyValuePair <CandidatePhrase, double> en2 in en.Value.EntrySet())
{
CandidatePhrase word = en2.Key;
ICounter <ConstantsAndVariables.ScorePhraseMeasures> scoreslist = new ClassicCounter <ConstantsAndVariables.ScorePhraseMeasures>();
double score = 1;
if ((patternScoring.Equals(GetPatternsFromDataMultiClass.PatternScoring.PhEvalInPat) || patternScoring.Equals(GetPatternsFromDataMultiClass.PatternScoring.PhEvalInPatLogP)) && scorePhrasesInPatSelection)
{
if (cachedScoresForThisIter.ContainsKey(word))
{
score = cachedScoresForThisIter.GetCount(word);
}
else
{
if (constVars.GetOtherSemanticClassesWords().Contains(word) || constVars.GetCommonEngWords().Contains(word))
{
score = 1;
}
else
{
if (constVars.usePatternEvalSemanticOdds)
{
double semanticClassOdds = 1;
if (dictOddsWordWeights.ContainsKey(word))
{
semanticClassOdds = 1 - dictOddsWordWeights.GetCount(word);
}
scoreslist.SetCount(ConstantsAndVariables.ScorePhraseMeasures.Semanticodds, semanticClassOdds);
}
if (constVars.usePatternEvalGoogleNgram)
{
double gscore = 0;
if (googleNgramNormScores.ContainsKey(word))
{
gscore = 1 - googleNgramNormScores.GetCount(word);
}
scoreslist.SetCount(ConstantsAndVariables.ScorePhraseMeasures.Googlengram, gscore);
}
if (constVars.usePatternEvalDomainNgram)
{
double domainscore;
if (domainNgramNormScores.ContainsKey(word))
{
domainscore = 1 - domainNgramNormScores.GetCount(word);
}
else
{
domainscore = 1 - scorePhrases.phraseScorer.GetPhraseWeightFromWords(domainNgramNormScores, word, scorePhrases.phraseScorer.OOVDomainNgramScore);
}
scoreslist.SetCount(ConstantsAndVariables.ScorePhraseMeasures.Domainngram, domainscore);
}
if (constVars.usePatternEvalWordClass)
{
double externalFeatureWt = externalWtsDefault;
if (externalFeatWtsNormalized.ContainsKey(word))
{
externalFeatureWt = 1 - externalFeatWtsNormalized.GetCount(word);
}
scoreslist.SetCount(ConstantsAndVariables.ScorePhraseMeasures.Distsim, externalFeatureWt);
}
if (constVars.usePatternEvalEditDistOther)
{
System.Diagnostics.Debug.Assert(editDistanceFromOtherSemanticBinaryScores.ContainsKey(word), "How come no edit distance info for word " + word + string.Empty);
scoreslist.SetCount(ConstantsAndVariables.ScorePhraseMeasures.Editdistother, editDistanceFromOtherSemanticBinaryScores.GetCount(word));
}
if (constVars.usePatternEvalEditDistSame)
{
scoreslist.SetCount(ConstantsAndVariables.ScorePhraseMeasures.Editdistsame, editDistanceFromAlreadyExtractedBinaryScores.GetCount(word));
}
// taking average
score = Counters.Mean(scoreslist);
phInPatScores.SetCounter(word, scoreslist);
}
cachedScoresForThisIter.SetCount(word, score);
}
}
else
{
if ((patternScoring.Equals(GetPatternsFromDataMultiClass.PatternScoring.Logreg) || patternScoring.Equals(GetPatternsFromDataMultiClass.PatternScoring.LOGREGlogP)) && scorePhrasesInPatSelection)
{
score = 1 - classifierScores.GetCount(word);
}
}
// score = 1 - scorePhrases.scoreUsingClassifer(classifier,
// e.getKey(), label, true, null, null, dictOddsWordWeights);
// throw new RuntimeException("not implemented yet");
if (useFreqPhraseExtractedByPat)
{
score = score * scoringFunction.ApplyAsDouble(new Pair <E, CandidatePhrase>(en.Key, word));
}
if (constVars.sqrtPatScore)
{
patterns.IncrementCount(en.Key, Math.Sqrt(score));
}
else
{
patterns.IncrementCount(en.Key, score);
}
}
}
return(patterns);
}
public virtual double GetCost(V value)
{
return(costFunction.ApplyAsDouble(value));
}
public static IList <T> GetNonOverlappingMaxScore <T, E, _T2, _T3, _T4>(IList <_T2> items, IFunction <_T3> toIntervalFunc, IToDoubleFunction <_T4> scoreFunc)
where E : IComparable <E>
where _T2 : T
{
if (items.Count > 1)
{
IDictionary <E, IntervalTree.PartialScoredList <T, E> > bestNonOverlapping = new SortedDictionary <E, IntervalTree.PartialScoredList <T, E> >();
foreach (T item in items)
{
Interval <E> itemInterval = toIntervalFunc.Apply(item);
E mBegin = itemInterval.GetBegin();
E mEnd = itemInterval.GetEnd();
IntervalTree.PartialScoredList <T, E> bestk = bestNonOverlapping[mEnd];
double itemScore = scoreFunc.ApplyAsDouble(item);
if (bestk == null)
{
bestk = new IntervalTree.PartialScoredList <T, E>();
bestk.size = 1;
bestk.score = itemScore;
bestk.@object = item;
bestNonOverlapping[mEnd] = bestk;
}
// Assumes map is ordered
foreach (E j in bestNonOverlapping.Keys)
{
if (j.CompareTo(mBegin) > 0)
{
break;
}
// Consider adding this match into the bestNonOverlapping strand at j
IntervalTree.PartialScoredList <T, E> bestj = bestNonOverlapping[j];
double withMatchScore = bestj.score + itemScore;
bool better = false;
if (withMatchScore > bestk.score)
{
better = true;
}
else
{
if (withMatchScore == bestk.score)
{
if (bestj.size + 1 < bestk.size)
{
better = true;
}
}
}
if (better)
{
bestk.size = bestj.size + 1;
bestk.score = withMatchScore;
bestk.@object = item;
bestk.lastMatchKey = j;
}
}
}
IntervalTree.PartialScoredList <T, E> best = null;
foreach (IntervalTree.PartialScoredList <T, E> v in bestNonOverlapping.Values)
{
if (best == null || v.score > best.score)
{
best = v;
}
}
IList <T> nonOverlapping = new List <T>(best.size);
IntervalTree.PartialScoredList <T, E> prev = best;
while (prev != null)
{
if (prev.@object != null)
{
nonOverlapping.Add(prev.@object);
}
if (prev.lastMatchKey != null)
{
prev = bestNonOverlapping[prev.lastMatchKey];
}
else
{
prev = null;
}
}
Java.Util.Collections.Reverse(nonOverlapping);
return(nonOverlapping);
}
else
{
IList <T> nonOverlapping = new List <T>(items);
return(nonOverlapping);
}
}
